Protein

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Genbank accession
AVQ09789.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
Protein sequence
MHLPNGSQIFIENTRGVAVSATNVSNATKPEFTLDSGGDGFQKGDYIIVTASSWGKLLDRVLRVTAAESTKVTVEGIDTTDTNVFPSGAVTASFAKINGWTEIPCVQDLGQDGGEQQYYNYQCLSDDQEQQLPTYKSAVSLTYTFAHEYDNPIYPLLRKADESGDVKALRMYVPKAKEMRLWAGVLSFNEIPQTAVNEMETVSLSVSLKGRFTFLPANQD
Physico‐chemical
properties
protein length:220 AA
molecular weight: 24180,73710 Da
isoelectric point:4,74489
aromaticity:0,09545
hydropathy:-0,32000

Domains

Domains [InterPro]
DC_0037
ATT
1–55
DC_0037 IPR014918
IPR014918
TAS
52–215
IPR014918
AVQ09789.1
1 220
Architecture
ATT
TAS
ATT 1-55 | TAS 56-215 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenS_PHB07
[NCBI] 		2136179 Uroviricota > Caudoviricetes > Drexlerviridae > Tlsvirus > Tlsvirus PHB07
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVQ09789.1 [NCBI]
Genbank nucleotide accession
MH102284.1 [NCBI]
CDS location
range 29961 -> 30623
strand -
CDS
ATGCACTTACCTAACGGATCACAGATTTTTATTGAAAACACGCGCGGCGTGGCAGTAAGCGCAACCAACGTAAGCAATGCAACCAAACCGGAATTCACGCTTGATAGCGGCGGTGATGGATTCCAGAAAGGTGATTACATTATTGTTACCGCCTCAAGTTGGGGTAAATTGCTTGATCGCGTTCTGCGTGTGACGGCGGCGGAATCAACTAAGGTTACTGTTGAAGGTATCGACACAACCGATACTAACGTTTTTCCGTCTGGCGCTGTAACTGCGAGCTTTGCGAAAATCAACGGTTGGACAGAGATCCCATGCGTACAGGACTTGGGGCAGGACGGAGGCGAGCAACAGTATTACAATTACCAGTGCTTGAGCGATGACCAGGAGCAGCAGTTACCAACCTATAAAAGCGCGGTATCACTGACTTACACATTTGCGCATGAATACGATAACCCGATTTATCCGCTCTTGCGTAAGGCTGACGAATCCGGCGACGTTAAAGCATTGCGCATGTATGTACCAAAAGCGAAAGAAATGCGCCTTTGGGCTGGTGTGCTCTCTTTCAACGAGATCCCACAAACGGCGGTAAACGAAATGGAAACCGTTTCTTTGTCGGTATCCCTGAAAGGTCGCTTTACTTTCCTTCCTGCTAACCAGGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
54d589f6a29c96034f652b807882fa212c752aa1daf763d3528d2ac1431d8db2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9443
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Three Siphoviridae Salmonella enterica serovar enteritidis bacteriophage show promising potential for phage therapy Chen,Y., Sun,E., Yang,L. and Wu,B. 2018-11 — GenBank