Protein

View in Explore
Genbank accession
QVW29310.1 [GenBank]
Protein name
short tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSNNTYQHVSNESVYVEFDPTGSNFDSSITNVQAALASISAYGVKGVPEASEAEKGVIQLASEQEVLDGFNSTKAVTPATLNARLQYPNASETQYGVTKYATQEEAIAGTLDTVSITPLKLNQTIDNTFSTRYSTETTNGVIKIATQTAALAGSDDTTAMTPLKTQQLAIKLISQIAPNNDPASESITGVVRLATVAQTRQGTLREGYAISPYTFMNSVATQEYKGVIRLGTQAEINSNLGDVAVTGETLNGRGATGSMRGVVKLTTQAGIAPEGDSSGALAWNADVINTRGGQTINGSLNLDHLTANGIWSRGGMWKNGDQPVATERYASERVPVGTIQMFAGDSAPPGWVLCHGGTISGDQFPDYRNVVGTRFGGDWNNPGIPDMRGLFVRGAGTGSHILNQRGQDGYGKDRLGVGCDGMHVGGVQAQQMSYHKHAGAWGENGNSRGYAPFGASNGNGYLGNGKSADWDNHLFFTNDGFEMGGARDSFGTLNREGLIGYETRPWNISLNYIIKVHY
Physico‐chemical
properties
protein length:518 AA
molecular weight: 54996,04470 Da
isoelectric point:5,35431
aromaticity:0,07915
hydropathy:-0,38745

Domains

Domains [InterPro]
DC_0176
STR
1–439
DC_0176
G3DSA:2.10.280.10
Unmapped
246–286
G3DSA:2.10.280.10 IPR037053 IPR044916
IPR015173
STR
246–324
IPR015173 SSF88874
SSF69349
STR
246–346
SSF69349 IPR027448
IPR011083
ATT
337–392
IPR011083
QVW29310.1
1 518
Architecture
STR
ATT
STR
STR 1-323 | ATT 324-392 | STR 393-516 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_SQ17
[NCBI] 		2834246 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVW29310.1 [NCBI]
Genbank nucleotide accession
MW882907.1 [NCBI]
CDS location
range 90035 -> 91591
strand +
CDS
ATGAGTAACAATACATATCAACACGTTTCGAACGAATCTGTATATGTTGAATTTGACCCTACCGGGTCAAATTTTGATAGTTCAATAACCAATGTCCAGGCAGCCTTAGCCTCAATTAGCGCATATGGTGTTAAAGGTGTTCCGGAAGCAAGCGAAGCAGAAAAAGGTGTAATTCAATTAGCGTCAGAACAAGAAGTTCTTGATGGATTTAATAGTACTAAAGCCGTTACACCAGCAACATTAAATGCAAGACTTCAGTATCCGAACGCGTCAGAAACACAGTACGGCGTAACTAAATATGCAACACAAGAGGAGGCCATTGCTGGCACTTTAGACACTGTTTCTATTACTCCGCTTAAATTAAACCAAACTATTGATAACACTTTCTCTACTCGGTATTCAACAGAAACAACTAACGGTGTTATTAAAATTGCAACTCAAACCGCGGCACTTGCTGGATCTGATGACACCACAGCAATGACTCCGCTTAAAACGCAACAATTAGCAATAAAATTAATTTCTCAAATAGCTCCTAATAACGACCCGGCTTCAGAATCTATTACCGGTGTTGTGCGTTTAGCTACGGTGGCTCAAACACGTCAAGGAACTCTTCGCGAAGGATATGCAATTTCCCCGTATACCTTTATGAATTCTGTTGCAACACAAGAATATAAAGGTGTTATACGTCTAGGAACACAAGCGGAAATTAATAGCAATTTGGGAGATGTTGCTGTAACAGGTGAAACGCTAAATGGTAGAGGAGCTACCGGTTCTATGCGTGGAGTCGTAAAATTAACGACGCAGGCTGGTATTGCCCCTGAAGGCGATAGCTCTGGAGCATTAGCATGGAACGCAGATGTAATTAATACACGCGGTGGGCAAACTATTAATGGTTCTTTAAATTTAGATCACCTCACAGCAAATGGAATTTGGTCGCGTGGCGGAATGTGGAAAAACGGTGACCAGCCAGTTGCAACAGAGAGATATGCATCTGAACGTGTTCCTGTTGGAACAATTCAAATGTTCGCAGGTGATAGCGCTCCTCCAGGTTGGGTTTTATGTCATGGTGGGACCATTTCTGGAGACCAATTTCCGGACTATCGAAATGTGGTCGGAACAAGATTTGGCGGTGATTGGAATAATCCTGGTATTCCTGATATGCGAGGTCTTTTTGTTAGAGGAGCTGGCACAGGCAGTCATATTTTAAATCAACGCGGACAAGATGGTTATGGGAAGGATAGACTTGGTGTAGGATGTGACGGAATGCATGTTGGCGGTGTTCAGGCACAACAAATGTCATACCATAAACATGCTGGTGCCTGGGGGGAAAATGGAAATAGCAGAGGTTATGCACCGTTTGGAGCATCTAATGGCAATGGATATTTAGGCAATGGTAAAAGCGCCGACTGGGACAACCATTTGTTCTTTACTAACGACGGATTTGAAATGGGTGGTGCTCGTGACTCGTTTGGCACGTTAAACCGTGAAGGATTAATTGGTTATGAAACTAGACCATGGAATATATCATTAAATTATATTATTAAAGTCCATTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9f611db124bbc226dae601cd71492f6f79fde5eddbf3644c15ea1c0ab89990cb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6683
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50