Protein

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Genbank accession
QGZ17850.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,67
TF
Evidence RBPdetect2
Probability 0,83
Protein sequence
MANSTSANLKLTVQATGENSGTWGQITNTNLLILEQAIGGFTTFNITNAARSLTFTNGALSNGKNEVIKLTGTLASNLTVSIPDSVEKTYLVEDACNHAGFTLTFKTSSGTGVLLCEGNNYTLYSDGTNVVKLHEQRNWRAVSAAETVQAGAKLLVNTNGGAVTVTLPASPATGDEVHFVDQGYDFNTNALTVGRNSSNIANAASDLVVNTQGAAFGLVYSGDATTGWTYTEK
Physico‐chemical
properties
protein length:233 AA
molecular weight: 24341,57670 Da
isoelectric point:4,96059
aromaticity:0,07296
hydropathy:-0,09571

Domains

Domains [InterPro]
DC_1179
STR
1–232
DC_1179
IPR027411
Unmapped
134–233
IPR027411
QGZ17850.1
1 233
Architecture
STR
STR 1-232 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC027P
[NCBI] 		2686457 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ17850.1 [NCBI]
Genbank nucleotide accession
MN698241.1 [NCBI]
CDS location
range 40439 -> 41140
strand +
CDS
ATGGCGAATTCAACATCAGCAAATTTAAAACTTACCGTACAAGCAACTGGGGAAAACTCAGGAACTTGGGGACAAATTACAAATACTAACCTTTTAATTCTAGAACAAGCAATTGGTGGTTTTACTACTTTTAATATTACTAACGCTGCTAGATCTTTAACTTTTACTAATGGTGCTTTATCAAATGGTAAAAACGAAGTTATTAAATTAACAGGAACTTTAGCTTCTAACCTTACTGTTAGTATTCCAGACTCAGTTGAAAAAACTTATTTAGTTGAAGATGCATGTAATCATGCAGGTTTCACTTTAACTTTTAAAACTTCATCTGGAACAGGTGTATTATTATGTGAAGGAAATAATTACACATTATATTCTGATGGAACTAATGTTGTAAAACTTCATGAACAAAGAAACTGGAGAGCAGTTTCAGCAGCAGAAACAGTTCAAGCTGGCGCTAAACTTTTAGTAAATACAAATGGTGGAGCAGTTACAGTAACGCTTCCAGCCTCACCTGCTACAGGAGATGAAGTACATTTTGTAGATCAAGGTTATGATTTCAATACTAACGCATTGACTGTTGGTAGAAACTCTTCTAATATAGCTAATGCAGCATCTGATCTTGTAGTTAATACTCAAGGTGCAGCTTTTGGATTAGTATATTCAGGCGACGCTACAACAGGATGGACTTACACGGAGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1f885685665f1a74cd37a3fee5d56c71014a1d14789209f428214bbe808c67a0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9452
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel pelagiphages prevail in the ocean Zhang,Z., Qin,F., Chen,F., Chu,X., Luo,H., Zhang,R., Du,S., Tian,Z. and Zhao,Y. 2019 — GenBank