Protein

View in Explore
Genbank accession
AWY03264.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,80
TF
Evidence RBPdetect2
Probability 0,74
Protein sequence
MAGLNETNKWETEIYRIEENDPVHGGEDGITNKPLKQLANRTKYLKAEIEKRYIAQDASTEQKGLVQLDSSTDSNAEDKAATPKAVNVVKALVIAVRNALNNYIPNSKKSNADNSSSSDTIATSYALKKVRDIATTRATDAVAGQTVLSHKTNGTDKTKAATEFALNELNKELAGKGVPLGAVVSFPKGMNPRGYLRAIGGTFNRVTYPDLYVANGNSDILPNLHRSDVGMTAYFPFDSIPEGWIAFDSIRSTVTQQNYPELYQYLVDKYGSISNVPLAEDRFIRNAGNGLIVGQTQSDEIKKHVHTQALDDGGRDENKFNSIFDENSISDYDYNLNVGLPVDNGYSDNFWATPRLDSKLATGGDETRPKSIAFKLCVKARNTFDDVVFWIKAFGSVENTGQMDAANLAQEIQDIRYEKADKIHNHSYSDIVDFNEGVAAQFFYQKTENFEVFKYPDGSMIQIYKSNPILNHGNTSLGFTFNWAQAFKSNPALTWSVYSEQHEVRDCWVTFNKSGTTNTKVKYWIFEGSYNTSNLEVNIIAIGRWK
Physico‐chemical
properties
protein length:546 AA
molecular weight: 60863,87490 Da
isoelectric point:5,63169
aromaticity:0,10440
hydropathy:-0,54927

Domains

Domains [InterPro]
DC_1854
STR
36–109
DC_1854 SSF88874 IPR037053 DC_0818
IPR051934
Unmapped
47–152
IPR051934 IPR037053 SSF88874
IPR005068
STR
59–89
IPR005068 DC_1651
AWY03264.1
1 546
Architecture
STR
ATT
STR
RBD
STR 36-176 | ATT 177-286 | STR 287-380 | RBD 381-546
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pasteurella phage AFS-2018a
[NCBI] 		2201988 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pasteurella multocida
[NCBI] 		747 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pasteurellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AWY03264.1 [NCBI]
Genbank nucleotide accession
MH238466.1 [NCBI]
CDS location
range 30318 -> 31958
strand +
CDS
ATGGCAGGTTTGAACGAAACCAATAAATGGGAAACCGAAATTTATCGCATAGAAGAAAATGACCCCGTACATGGGGGTGAAGACGGCATTACGAATAAGCCACTCAAACAATTAGCGAATCGTACTAAATATCTCAAAGCTGAAATAGAAAAACGCTATATCGCACAAGATGCTTCAACAGAACAAAAAGGGCTTGTTCAACTTGATTCTAGCACTGATTCAAACGCTGAAGATAAAGCAGCAACACCGAAAGCTGTGAATGTTGTTAAAGCGTTAGTGATTGCTGTGAGAAATGCGCTAAATAACTATATTCCAAACAGCAAGAAATCAAATGCTGATAACAGCTCAAGTTCAGACACTATTGCAACGAGTTATGCTCTTAAAAAGGTACGTGATATTGCAACAACAAGAGCAACAGACGCAGTTGCTGGACAAACAGTACTGTCACATAAAACAAATGGCACAGATAAAACAAAGGCAGCAACAGAGTTTGCGCTAAATGAATTAAATAAAGAATTAGCGGGTAAAGGTGTGCCACTTGGTGCAGTGGTGTCTTTTCCCAAAGGCATGAATCCACGCGGTTATTTAAGAGCAATAGGCGGCACATTTAATAGAGTAACATACCCAGATTTGTATGTCGCAAATGGCAATAGTGACATCTTACCGAATTTACATCGCAGTGACGTGGGAATGACTGCGTATTTTCCATTTGACAGTATTCCAGAGGGCTGGATTGCATTCGATAGCATTCGCTCAACAGTCACACAACAGAATTATCCAGAGTTGTATCAATATCTTGTTGATAAATATGGTTCTATTTCAAATGTGCCATTAGCTGAAGACCGATTTATCCGAAACGCAGGGAACGGATTAATTGTCGGTCAGACACAGAGTGACGAGATAAAAAAACACGTTCATACTCAAGCACTTGACGACGGAGGTAGAGATGAAAATAAATTTAATTCAATTTTCGATGAAAACTCAATATCAGATTATGACTACAATTTAAATGTTGGATTACCAGTCGATAATGGGTATAGCGATAATTTTTGGGCTACGCCAAGATTAGATAGCAAACTGGCAACTGGAGGAGACGAAACACGTCCAAAATCAATTGCATTTAAATTGTGTGTTAAAGCAAGAAACACTTTTGACGACGTAGTGTTCTGGATAAAAGCATTCGGTTCTGTTGAAAATACAGGTCAAATGGATGCAGCAAATTTAGCCCAAGAGATTCAAGATATTCGTTATGAAAAAGCAGATAAAATACATAATCACAGTTACAGTGATATTGTAGATTTTAATGAGGGTGTTGCGGCGCAATTTTTTTATCAAAAAACAGAAAATTTTGAAGTATTCAAATACCCGGATGGTTCAATGATTCAAATTTATAAAAGTAATCCTATATTGAATCATGGTAATACTTCTCTAGGATTCACTTTTAATTGGGCACAAGCATTTAAATCTAATCCAGCTTTAACTTGGTCTGTATATTCAGAACAACACGAAGTTAGGGATTGCTGGGTTACTTTTAATAAAAGCGGAACTACTAATACAAAAGTAAAATACTGGATTTTTGAAGGCTCATACAACACAAGTAATCTGGAAGTAAATATTATCGCTATCGGCAGATGGAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
30c98ceb29d7014f8a8edbff15ba3948c0fe8be409baa3f1554782a06aab5b9e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7471
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage-inducible chromosomal islands are ubiquitous within the bacterial universe Fillol-Salom,A., Martinez-Rubio,R., F Abdulrahman,R., Chen,J., Davies,R. and Penades,J.R. 2018 29875435 GenBank