Protein

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Genbank accession
YP_010763065.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MADYSQLPIENIWSTGGDMVAPTPAQQQGGWGIQSVPRQWWNWKWNLHDTNLAYLLQKGIPEWTSTQEYIANKSFCTRSGFVYKAVRTHTGSDPAQVSANWVRAFADYTTASSALGGLTPREGGIPFFISATGASVFDSTAYGRGMLNVANASAARSYISAQESSVVLSNLSTVTRAANTVPYFNTDTSMATFNITAFGRGLVNAANAENARNFLGLANSAIITADPANRAHTLVYRDAAGNFNAGVITATLSGNATTASKLRAPVTINGVAFDGSQNIVLPGLDTSYAGVVARLHINGANMTGTDKTTQLALRNKSDTDWISLVTPDDSSLVFQFRGPEAANATLRVNSNVVFHAGNQYGLGATQTQARERLMVDRLAQNTTQTVLYNADKSRYFWLQDNGVSGIWDATTNTPLWRFSRLGQLDYGTVPVAQITGLANSATIPASASNMTNQIVVRSGTGDIAVQGVTAFGAVLGTDYIRVRASTGNAHLVFQRNDGAEVGLIWGIPSANSLNFRTAGGATGMSLAGQDLTVVGRVNAATLNSSGNVNSGNSVIAAGNVQAAGRVYCGDAFMSSNGNLTGGAFGSYGTLTNWVDSVYARKTDVMTDAQILAATSRGSAQAVGTYVFAIAASGSGDVGTVVAGTSLRSSSPVNYHGTTLSGSYRCMGRFGAGGSNQITLFQKVAA
Physico‐chemical
properties
protein length:685 AA
molecular weight: 71845,01500 Da
isoelectric point:9,08084
aromaticity:0,08759
hydropathy:-0,06569

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaM_EPA1
[NCBI] 		2587493 Uroviricota > Caudoviricetes > Vandenendeviridae > Pakpunavirus > Pakpunavirus EPA1
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010763065.1 [NCBI]
Genbank nucleotide accession
NC_073609.1 [NCBI]
CDS location
range 44745 -> 46802
strand +
CDS
ATGGCTGATTACAGTCAACTACCTATTGAAAATATTTGGTCCACAGGCGGGGATATGGTAGCCCCGACCCCTGCGCAGCAGCAAGGCGGATGGGGTATTCAGTCGGTTCCTCGCCAATGGTGGAACTGGAAGTGGAACCTTCACGATACTAACCTAGCGTATTTGCTACAGAAGGGCATCCCAGAGTGGACTAGTACACAAGAGTACATTGCTAACAAATCGTTCTGCACTAGAAGTGGATTTGTTTACAAGGCTGTTCGTACGCATACAGGAAGCGACCCTGCACAAGTTAGTGCCAACTGGGTTCGAGCTTTTGCAGATTACACCACAGCTAGTTCAGCACTAGGGGGCCTGACTCCAAGGGAAGGAGGTATTCCTTTCTTCATTAGCGCTACAGGAGCTAGCGTGTTTGACTCTACGGCCTATGGTCGCGGAATGTTGAATGTAGCTAATGCCTCCGCAGCTAGAAGCTACATTTCGGCTCAAGAAAGCTCTGTTGTACTGTCCAACCTGTCCACTGTGACTAGGGCTGCCAACACGGTTCCGTACTTCAACACGGATACCTCCATGGCTACCTTCAACATCACAGCGTTCGGAAGAGGACTTGTCAACGCGGCTAATGCTGAAAACGCAAGAAATTTCCTAGGACTAGCTAACTCTGCTATCATTACGGCAGACCCAGCTAACAGGGCACATACTCTGGTCTATAGAGACGCTGCTGGTAACTTCAACGCTGGTGTGATTACAGCCACTCTTTCTGGTAACGCGACTACAGCCAGCAAGCTCAGGGCTCCAGTTACGATTAACGGCGTAGCGTTCGACGGAAGCCAGAACATTGTTCTGCCGGGCCTAGATACAAGCTACGCCGGGGTTGTAGCGAGGCTCCATATTAATGGAGCTAACATGACCGGAACAGATAAGACTACCCAGTTGGCTCTTAGAAATAAATCTGATACAGATTGGATTAGCTTGGTGACTCCTGATGACAGCTCGTTGGTATTTCAATTTAGAGGGCCAGAAGCGGCTAACGCCACTCTGCGGGTTAACTCTAATGTTGTGTTCCACGCGGGAAACCAGTATGGACTAGGAGCTACTCAAACTCAAGCCAGAGAGCGGCTCATGGTTGACAGGCTGGCACAGAACACGACTCAGACTGTGCTGTACAACGCAGATAAGAGCAGGTACTTCTGGTTGCAAGATAACGGTGTTTCCGGTATCTGGGACGCAACGACTAACACCCCTCTATGGCGTTTTTCTAGACTAGGCCAGCTCGACTACGGAACAGTCCCTGTTGCACAAATTACAGGATTGGCCAACTCCGCGACAATTCCGGCATCCGCCTCCAATATGACTAATCAGATTGTTGTGAGGAGCGGAACAGGAGATATCGCAGTACAAGGCGTTACAGCGTTTGGCGCTGTTCTGGGAACAGACTATATTAGAGTAAGAGCCAGCACTGGTAACGCTCACCTAGTATTCCAGAGGAATGATGGAGCAGAGGTAGGGCTTATTTGGGGAATCCCGTCTGCCAACTCTCTGAACTTCAGGACCGCAGGCGGTGCGACAGGCATGTCTCTGGCTGGTCAGGACTTGACTGTAGTTGGCAGGGTGAATGCTGCGACACTCAATTCGTCTGGCAACGTCAACTCTGGTAACAGCGTGATTGCTGCCGGGAACGTGCAGGCTGCTGGCCGTGTGTACTGCGGCGATGCTTTTATGAGCAGCAACGGCAACCTTACTGGCGGAGCTTTCGGCTCTTATGGGACTCTTACCAACTGGGTAGATTCTGTATATGCAAGAAAGACGGACGTAATGACCGATGCCCAAATCTTGGCTGCCACTTCTAGAGGTAGTGCTCAGGCTGTTGGAACATATGTCTTTGCGATTGCAGCTAGCGGGAGCGGGGATGTTGGGACTGTAGTAGCTGGTACGTCTCTAAGGTCTTCGTCTCCCGTCAACTACCATGGAACTACGCTATCCGGTAGCTACAGGTGCATGGGTAGGTTCGGAGCCGGAGGTTCTAACCAGATTACCTTGTTCCAGAAGGTTGCAGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4a2b83780e6e8630c99b3c6423da072b3a329f993f3d817fd1c02927e3ca52c4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6343
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of Pseudomonas phage EPA1 Akturk,E., Melo,L., Santos,S., Oliveira,H. and Azeredo,J. 2016-12-01 — GenBank