Protein

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Genbank accession
XPK40680.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect2
Probability 0,67
Protein sequence
MPVIHVQKMPGTPKETGIVPAGTNLWKWLNKSNLPASISIAVNGRVLGEDDELSFCLRDGDVVNVYCQPSGAIGDLIGAILKPVTKIFSFLTPKVSTPKTDTSSKTSPNTSLKAQTNIARNGEARPDNFGQIRAFPDLLQESLFEYINNIKYVTEFMNFGLGKYDVSSVRYSESNLGSLAGASYTIYQPGEVIPVVYEPYAFDDVDGQELYGPNELDTNPPPVVIETATTTTVTETEFAGGQIAVKIPKNSAFDYFVDLTMPHDVVFKLNITYAQGGGASVTENVTLSGRLVSATETDDGGLPPVNYWYTFIINSINYSGAPISSLNGVTINNTYFNLTDNQPIVSGPYFSPIEGDQLWVHISHQAGEDARPTALIEWWKLDDDNNQVPGTYQSYNFDGGEAPRQDTFYWTLKFSPSGGTGRYAVQLRRTNNSNSMSIMQVEEIHSIVTRTNVSYPDDTVVKVIVRATENATGSRDRKYNALITRHTIGYNRDAGTVRYTLAPSRSFADAVLHNWLITAGNPENTIDIVKLYEIADSLPDERLGYFDYTFDDEDKSIGERLQTICDAARVTAFWDDGVMSFSRDEKREYPATVFNTRNTQSDGYKLSYDISLPGTYDGVNVEYRDPTTNKQANVYYRITDSGIVEGEPTKAKKFDMLYVRNRYQAVDRAILECRRLIYSRRSMEIKALADGEWVNVGDMIQVVDMYDDVQQTGVIEARNGNIFTTSEQLTADDNLYVVITSSDGSVSDRLPATITGLHTFTCNLPSDFQLNIWDGTNVQSESRYVLSTEKELDTTLWVVSQKNPGSDGTTTLTMSEYSDDMYEYTIPSS
Physico‐chemical
properties
protein length:829 AA
molecular weight: 92189,29830 Da
isoelectric point:4,60131
aromaticity:0,10253
hydropathy:-0,39300

Domains

Domains [InterPro]
DC_0118
STR
1–671
DC_0118 DC_0808
NF040662
Unmapped
355–823
NF040662
XPK40680.1
1 829
Architecture
STR
RBD
STR 1-671 | RBD 687-828 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage ClaudiaMuster_Bas77
[NCBI] 		3398408 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPK40680.1 [NCBI]
Genbank nucleotide accession
PQ850598 [NCBI]
CDS location
range 30235 -> 32724
strand +
CDS
ATGCCAGTAATTCATGTTCAGAAGATGCCGGGCACGCCGAAAGAAACAGGAATTGTGCCAGCGGGCACAAACCTTTGGAAGTGGCTGAATAAATCAAATCTACCAGCCAGCATTTCAATTGCGGTAAATGGCAGAGTGCTTGGTGAAGATGATGAGCTTTCTTTCTGCCTGCGCGATGGCGACGTGGTCAACGTTTATTGTCAGCCGTCAGGCGCAATCGGCGACCTTATCGGCGCAATACTGAAGCCAGTAACGAAGATTTTCTCTTTTCTTACACCAAAAGTATCCACGCCGAAAACGGATACCAGCTCCAAAACATCACCGAATACCAGCCTAAAGGCGCAAACCAACATTGCGCGAAATGGCGAGGCGCGCCCTGATAACTTCGGGCAGATTCGTGCATTCCCTGATTTGCTTCAGGAATCATTATTTGAATACATCAACAATATTAAATATGTCACAGAGTTCATGAATTTTGGCCTCGGTAAATATGATGTATCATCCGTGCGTTATTCTGAGTCAAACCTCGGTTCACTGGCTGGCGCGAGTTACACCATCTATCAGCCTGGAGAAGTTATTCCGGTTGTGTATGAGCCTTATGCATTTGATGATGTTGATGGGCAGGAGCTTTACGGGCCAAACGAACTGGATACTAACCCACCACCAGTAGTCATTGAAACTGCGACAACAACCACGGTTACAGAAACAGAATTTGCTGGTGGTCAGATTGCTGTCAAAATACCGAAAAACTCAGCATTCGATTACTTCGTTGACCTAACTATGCCTCATGACGTGGTGTTCAAACTGAATATCACTTACGCGCAGGGGGGTGGTGCATCTGTCACCGAAAACGTTACGCTATCAGGAAGACTTGTATCTGCAACCGAGACTGATGATGGTGGTTTGCCGCCAGTAAACTACTGGTACACATTTATTATTAACAGCATCAACTACTCAGGCGCGCCAATATCATCATTGAACGGCGTGACGATTAACAACACCTATTTCAACCTAACTGACAACCAACCAATCGTTTCTGGTCCTTACTTTTCGCCAATTGAAGGTGATCAGTTATGGGTGCATATATCACATCAGGCCGGAGAGGATGCTAGGCCAACCGCACTTATTGAATGGTGGAAACTGGACGATGACAACAATCAGGTTCCGGGAACTTATCAGTCCTACAACTTTGATGGTGGCGAGGCACCACGGCAGGATACTTTTTACTGGACGTTAAAGTTCTCTCCATCAGGAGGAACTGGTCGCTATGCTGTGCAGTTACGAAGAACAAACAACAGCAACAGCATGTCAATCATGCAGGTTGAGGAAATCCACTCAATCGTCACTCGCACCAACGTTTCGTATCCAGATGACACCGTGGTTAAGGTTATCGTGCGAGCAACAGAGAACGCCACAGGCAGTCGTGACAGGAAATATAATGCGTTAATCACACGTCACACCATCGGATATAACCGAGATGCTGGCACCGTGCGCTACACGCTAGCACCTTCTCGCAGTTTTGCTGATGCTGTGCTGCATAACTGGCTGATTACCGCTGGCAATCCAGAAAATACCATCGACATAGTGAAGCTGTATGAAATTGCCGACAGCCTGCCTGATGAGCGTCTTGGTTATTTCGATTACACGTTTGACGATGAGGATAAGAGTATCGGCGAGCGCCTGCAAACAATCTGTGATGCGGCCCGTGTTACTGCATTCTGGGATGATGGGGTAATGAGCTTCTCTCGCGATGAGAAACGAGAATATCCGGCAACTGTATTCAATACCAGAAACACACAGAGCGACGGCTATAAGCTGAGTTATGACATCAGTCTTCCAGGCACTTACGATGGCGTTAACGTTGAATATCGTGACCCAACAACGAACAAGCAGGCCAACGTTTACTATCGAATTACCGATAGCGGAATAGTCGAAGGGGAACCAACGAAAGCCAAGAAGTTCGACATGCTTTATGTTCGCAATCGCTATCAGGCTGTTGACCGCGCAATCCTTGAGTGTCGCCGACTTATTTATTCACGCCGTAGCATGGAAATTAAAGCGCTGGCAGATGGCGAATGGGTTAACGTAGGCGACATGATTCAGGTTGTCGATATGTATGATGATGTGCAACAGACTGGCGTTATTGAAGCGCGTAACGGGAACATATTCACAACCAGCGAGCAACTCACGGCAGATGATAATCTCTACGTTGTGATTACCAGTTCTGACGGCAGCGTGTCAGACAGATTGCCAGCAACAATAACAGGATTGCATACATTCACCTGCAACCTGCCATCTGATTTTCAGTTAAATATTTGGGACGGAACAAACGTACAATCCGAATCTCGTTACGTACTGAGCACGGAGAAGGAACTTGATACTACTTTATGGGTTGTCAGTCAGAAGAATCCAGGCAGTGATGGAACAACAACGCTGACGATGAGTGAATACTCTGATGATATGTACGAATATACCATCCCGTCATCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
38736c9fcc5557ca916c123dc7cb092dacaaafbd195a27786f4356aced7ef526
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3123
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of Escherichia coli phages Huey, Dewey, and Louie Maffei,E., Willi,L. and Harms,A. — — GenBank