Protein

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Genbank accession
WWT36645.1 [GenBank]
Protein name
long tail fiber proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,79
TF
Evidence RBPdetect2
Probability 0,78
Protein sequence
MADFSQHFKATFGFDAGNEKVVNVALADKNVNTDAVNVEFFNYHNGITQYDTTRGYDQYGTTIYQNRPYYAKEDITKPAGDFDPTKWQALRTDPRWDYVAATSGDTPLKSGDYIAADCQFANLTFSMPTNPAEGDTITVKDIGGKCGVNELSFLAAGHEFYHNGVVNNRKWYCTTPYAMNYFIFVRNRWHVYQTGTEPRGVYAQPSIDPIQMQNGDQVFRRSSLGNIVLMLPKFANNGDMIQTTDLDGLTATNHVTVKVHEGAQEQSIGTFGLKEIVGKRSGHGVFIFDKPENLWRVWDGDQSVRLNPIINDTRLSPNSYVAVFGDHDVTLTLPSNVEPGDRIQVSMQYMHGNQTCRIITAAEDTKILMQKNMVQFPKRSEYPFNGTDTWTEVSELSFNAANDYVPYLEFSYSEGDDGKKHWLVAHAHPIVERVDPTRKDRVGVIALATQDETNKNHEDNPSDEVAVTPKVLANKTANETRRGIARIATQAETHQDTGSSFLDDVIVTPKKLNDCVATEDRRGVMEIATQHETNEGLDDTRAITPKKLEERRASEDLAGIAEIVQVGGNAAARRGEAGTGIYNINDHAKIVTPQNINEVKATETSRGVGYLATDAEVQGATESTPQDALLITTRTLTKRTATESRTGIAEIATQEETNLGQSDNHIITPKKLHTRRATETLHGLAEIATQPEFDAGRDDARISTPLKIKTFFENAQRLKVDPTQGLNLTGDLWQGIMISGLDATEDTKGVAKVATTQLTDAGEDDATIITPKKLQGKKATEGKEGIIRIGTQAETVAGTMDNVAISPKNFKYVAQTEESWQATEARRGFLKVATQENCFVGDNLQGSTQDLDNYQHDGIAVTPKGLNYALANFLPKMATAQNSLKLGNVEAAKWARRDIDQTIESNYTFNKNVNVKGDLECLKSGSFETLYVTKNSTDDPSNGHLVLGERGVDGHTGITLHGTTLSEGMENSWSIIVGGTGTAQVVDSDAIAFGKINDGGFVEHYAFAMEHNGDAAAYRDFIAGRNLYAKQGGLYIVDQSNPAMTRSPDGMLNIGHGGSVNIKAGYQTLTTEIAGQKYQIVHAGNADEVLNRQFVKNAGDTMTGKLIMDNASIVSVKHEAIATTAPAIGNIGFWNMRVTTQNIKETYPEKKNGTLMQWGTDENGLTQIWSPDGTHKHYIRSGTDGQWTAWGEIYTKQNKPTAQEIGAVVAEGGLMNSMTVRDWIKVGNVKIIANNLTRTVDFIWED
Physico‐chemical
properties
protein length:1246 AA
molecular weight: 136934,77020 Da
isoelectric point:5,33766
aromaticity:0,07705
hydropathy:-0,51509

Domains

Domains [InterPro]
DC_1946
ATT
1–208
DC_1946 DC_1209
cd19958
STR
1147–1194
cd19958
WWT36645.1
1 1246
Architecture
ATT
STR
ATT 1-208 | STR 341-1237 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WWT36645.1
1 1246
Domain Start End Length (AA) Confidence
N-terminal 1 363 363 0,5277
Central domain 364 705 343 0,0242
C-terminal 706 1246 540 0,4885
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-363
Central
364-705
C-terminal
706-1246

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage UPWr_E1
[NCBI] 		3127569 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWT36645.1 [NCBI]
Genbank nucleotide accession
PP418985 [NCBI]
CDS location
range 62561 -> 66301
strand -
CDS
ATGGCAGATTTTTCTCAACATTTCAAGGCCACATTTGGCTTTGACGCTGGTAATGAAAAGGTCGTCAATGTAGCATTGGCTGATAAGAATGTCAACACCGATGCGGTCAACGTTGAATTTTTCAATTACCATAATGGTATTACTCAGTATGACACAACTCGCGGTTATGATCAATACGGAACTACAATCTATCAAAACCGTCCGTATTATGCAAAAGAAGATATCACAAAGCCAGCAGGTGATTTTGACCCGACTAAATGGCAAGCACTGCGCACGGACCCACGTTGGGATTATGTTGCAGCAACTTCCGGCGATACTCCTTTAAAGTCCGGTGATTATATCGCAGCGGACTGTCAGTTTGCAAACTTAACATTCTCAATGCCTACTAATCCGGCAGAGGGCGACACTATAACAGTGAAAGATATCGGTGGCAAGTGCGGTGTTAATGAGTTATCGTTCCTTGCGGCTGGTCATGAGTTCTATCATAACGGTGTGGTAAACAACCGCAAATGGTACTGTACTACCCCTTATGCAATGAACTACTTCATTTTTGTTCGCAATCGCTGGCACGTTTACCAGACGGGAACAGAGCCGCGCGGGGTATATGCACAGCCGTCTATTGATCCGATTCAGATGCAAAACGGTGATCAGGTATTCCGTCGTAGTTCTTTAGGTAACATCGTTTTGATGCTTCCTAAGTTTGCTAATAACGGTGATATGATTCAGACTACCGACCTTGACGGATTGACTGCAACCAACCATGTTACGGTAAAAGTGCATGAAGGTGCGCAAGAACAATCAATCGGTACTTTCGGGTTAAAAGAAATTGTTGGTAAGCGTAGCGGTCACGGAGTATTCATCTTTGACAAGCCGGAAAACTTATGGCGTGTGTGGGATGGTGATCAGTCAGTTCGCTTGAATCCAATCATTAATGATACTCGCTTATCTCCTAATAGCTATGTTGCTGTATTTGGTGATCATGATGTTACTCTGACCTTACCGTCTAACGTCGAGCCTGGCGATCGTATCCAAGTTTCTATGCAGTATATGCACGGAAACCAGACCTGCCGAATCATTACCGCCGCAGAAGATACAAAAATTCTTATGCAGAAAAACATGGTTCAGTTTCCTAAGCGTAGCGAGTACCCATTCAATGGGACCGATACATGGACGGAAGTGTCTGAATTGTCTTTCAACGCTGCAAATGATTATGTACCTTATCTGGAGTTCTCTTATTCAGAAGGTGATGATGGTAAGAAACACTGGTTGGTGGCACATGCTCACCCGATTGTAGAACGAGTAGATCCGACTCGTAAAGATCGTGTTGGTGTAATTGCACTGGCTACCCAGGATGAAACAAACAAAAACCATGAAGATAATCCTAGCGACGAAGTTGCGGTGACTCCAAAGGTTCTGGCTAATAAAACAGCCAACGAAACTCGACGCGGTATTGCTCGCATTGCAACTCAAGCGGAAACGCATCAAGATACTGGTTCCAGCTTCCTGGATGATGTTATCGTTACACCTAAAAAGTTAAATGACTGTGTTGCTACCGAAGACCGTCGTGGTGTGATGGAAATTGCAACTCAACATGAAACCAACGAAGGTTTAGACGATACTCGCGCAATCACTCCTAAGAAGTTAGAAGAGCGTCGCGCGTCCGAGGATCTTGCTGGTATCGCTGAAATTGTTCAGGTAGGCGGTAATGCTGCCGCTCGAAGGGGTGAAGCTGGTACGGGGATCTATAACATCAACGACCACGCTAAAATCGTTACTCCGCAAAACATCAACGAAGTTAAAGCTACTGAAACTTCTCGTGGTGTTGGGTATCTGGCAACTGACGCGGAAGTGCAAGGGGCTACTGAATCAACCCCGCAAGATGCATTGCTGATCACTACTCGCACGTTAACCAAGCGTACTGCTACCGAATCCCGTACTGGTATCGCTGAAATTGCAACTCAGGAAGAAACAAACTTAGGTCAAAGTGATAACCATATCATCACGCCTAAAAAGCTACATACTCGCCGTGCAACTGAAACTTTACACGGTTTAGCAGAAATTGCAACTCAACCGGAGTTTGACGCAGGTCGTGACGATGCTCGCATTTCTACCCCATTGAAGATTAAAACCTTCTTTGAGAATGCACAGCGTTTGAAAGTAGATCCGACTCAGGGGCTTAACCTTACTGGTGACTTGTGGCAGGGTATCATGATCAGCGGTCTTGATGCAACCGAAGATACAAAAGGTGTCGCGAAAGTTGCAACTACTCAGCTTACGGACGCAGGAGAAGATGACGCTACGATCATTACTCCTAAAAAGCTGCAAGGCAAAAAGGCCACCGAAGGTAAAGAAGGTATTATCCGAATTGGTACTCAAGCCGAAACCGTCGCTGGTACTATGGACAATGTAGCAATTTCGCCTAAAAACTTCAAGTATGTTGCGCAGACAGAAGAGTCATGGCAAGCAACGGAAGCCCGTCGCGGATTCCTGAAAGTAGCAACACAAGAAAACTGTTTTGTTGGTGACAATCTGCAAGGTTCTACTCAAGATCTCGATAACTATCAGCATGATGGGATTGCGGTAACTCCGAAAGGATTAAACTACGCACTTGCTAATTTCTTACCTAAGATGGCAACCGCCCAGAATAGTTTGAAATTGGGTAACGTAGAGGCCGCTAAATGGGCGCGTAGAGACATTGATCAGACCATCGAGAGCAATTACACGTTTAATAAAAACGTTAACGTGAAGGGCGATTTAGAGTGCTTAAAATCAGGTTCCTTTGAAACTCTGTATGTGACTAAAAACTCTACTGACGATCCAAGTAATGGTCATCTGGTATTGGGTGAGCGTGGAGTTGATGGTCACACCGGAATTACATTGCATGGCACAACCCTGTCAGAAGGTATGGAAAACTCATGGTCTATTATCGTTGGTGGTACTGGTACGGCGCAAGTAGTTGATAGTGATGCTATCGCTTTCGGTAAAATTAATGATGGTGGATTCGTAGAGCATTACGCCTTTGCTATGGAACATAATGGCGACGCGGCAGCATATAGAGACTTTATTGCAGGTCGTAACCTGTATGCGAAACAAGGCGGTTTATACATTGTTGACCAGTCTAATCCGGCAATGACTCGTTCCCCAGATGGTATGTTGAATATCGGTCACGGTGGAAGTGTTAACATCAAAGCAGGTTATCAGACGCTTACTACAGAGATTGCCGGACAGAAATATCAGATCGTCCACGCAGGAAACGCAGACGAAGTTCTTAATCGTCAGTTTGTTAAGAATGCTGGCGATACAATGACTGGTAAATTGATTATGGATAATGCGTCTATTGTATCAGTTAAGCATGAAGCGATCGCTACTACTGCACCAGCAATTGGTAACATTGGCTTCTGGAACATGCGAGTAACTACCCAAAACATCAAAGAAACCTACCCAGAAAAGAAAAATGGTACATTGATGCAATGGGGTACTGATGAAAACGGCCTTACCCAAATCTGGTCGCCTGATGGTACTCATAAGCATTATATCCGTTCCGGTACAGATGGTCAATGGACCGCATGGGGCGAAATTTACACCAAACAGAACAAGCCTACTGCTCAGGAAATCGGGGCAGTGGTTGCCGAAGGTGGTTTGATGAACTCTATGACGGTTCGTGACTGGATCAAGGTTGGTAATGTTAAAATTATTGCCAATAATCTGACTCGTACCGTAGATTTTATCTGGGAAGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4d755f73d1cd82963de1fb5d47a419f2d94171713bdbdb303c86ab45c89895e7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2767
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage cocktail for biofilm control in poultry environments Sliwka,P., Saez Moreno,D., Korzeniowski,P., Milcarz,A., Kuczkowski,M., Koziol,S., Narajaczyk,M., Kolenda,R., Roesler,U., Tomaszewska-Hetman,L. and Kuzminska-Bajor,M. 2014-04-04 — GenBank