Protein

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Genbank accession
WNL51136.1 [GenBank]
Protein name
long tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,62
Protein sequence
MADTLKFRGLSTAEIDLDSVATREIVIDLEVNQLVIGGNGGTFSFYNSAQIDALLEPLISDIGGEDGGVSVDDLTNVDLQNLVYGDVLSWNGANWTNSGVDISRSTISNLGDVNISGTPAVGDYIIWNGLEWVNYAAPSVVNLSDTLVSAMGASNTYQSLAWDGTNWINQYIPLTAASDVDTSGVTAGQRLEYNGTQWVAVPNDADTLDTIDSTQFLRSDVVDYKTNGALVFEDAVQLSFGTTSDADFFFTGSTLYLDLNGGANDFLIRDNNTTRFTFTKTGNLTATGSITAGTLLGDGSSITDLNASNISSGTVNDAYLPATITSDITGNAASADTIDITASSTNTDYRVTFGGGTGAGQTLLNDGNLTYNPATNTLTAGFLTGNGSTLGSLNASNISSGTINDARLPATISSDITGNAATASQITVGDTVDLNIDCRVLLSTGTGTKSVVSDGQLKFNASTNVLTAGSFSGSMAYSNLTGTPTIPTNNNQLINGAGYITNASIPTATSDLTNDSGFITDITTQTDPKYLRSDTADTAAGSITFTANPRLNNDVRINFGTSSSISLRRDATNLIMDIPNSGTFFIRDT
Physico‐chemical
properties
protein length:589 AA
molecular weight: 61390,16200 Da
isoelectric point:4,05003
aromaticity:0,07301
hydropathy:-0,07963

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CREM2
[NCBI] 		3075959 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNL51136.1 [NCBI]
Genbank nucleotide accession
OR473000.1 [NCBI]
CDS location
range 169774 -> 171543
strand +
CDS
ATGGCTGATACTCTCAAGTTTCGTGGCCTATCCACAGCTGAGATTGACCTCGATAGTGTTGCCACACGAGAGATTGTTATTGACTTGGAAGTCAACCAGCTTGTCATTGGCGGCAACGGTGGGACTTTTAGTTTCTATAATAGTGCTCAGATAGACGCACTACTTGAACCACTTATTTCTGATATTGGTGGTGAAGACGGTGGCGTTTCGGTTGACGACCTCACTAACGTAGATTTGCAGAACTTAGTCTACGGTGACGTCTTGTCCTGGAACGGTGCCAACTGGACTAATAGTGGTGTTGATATTAGTAGGTCTACTATCAGTAACTTGGGTGATGTTAATATCAGTGGCACACCTGCAGTTGGTGATTATATCATTTGGAACGGTCTGGAGTGGGTAAACTATGCCGCACCCAGTGTTGTGAACCTCAGCGACACCCTTGTTAGTGCTATGGGTGCGTCTAATACTTACCAATCTCTTGCGTGGGATGGAACGAACTGGATAAACCAGTACATTCCCCTTACTGCTGCCAGTGACGTTGACACCTCTGGTGTTACAGCAGGTCAGCGTCTGGAATACAATGGCACGCAATGGGTTGCTGTTCCTAACGACGCAGACACGCTGGATACTATTGACTCTACCCAGTTCTTGAGGTCTGATGTTGTTGACTACAAGACAAATGGTGCTCTTGTTTTTGAAGATGCTGTTCAGTTGTCCTTTGGTACGACTAGTGACGCTGACTTTTTCTTCACAGGGTCAACCCTCTACCTGGACCTGAACGGCGGTGCTAATGACTTTCTTATTCGTGACAACAATACAACCCGCTTTACCTTCACAAAGACCGGTAACCTTACAGCAACAGGTAGCATAACTGCTGGCACCCTTCTGGGTGACGGTTCTTCTATCACTGACTTGAACGCTAGTAACATCTCTTCTGGTACTGTTAACGACGCTTACCTGCCTGCTACTATCACTTCTGATATTACCGGTAACGCTGCCAGTGCGGATACGATTGATATTACCGCATCGAGTACAAACACAGACTATAGAGTTACATTTGGCGGTGGAACTGGTGCTGGTCAGACCCTATTAAACGACGGCAACCTCACCTACAACCCTGCCACAAACACCTTGACTGCCGGATTCTTGACGGGTAACGGTAGTACTCTCGGCAGCCTGAATGCTAGTAACATCAGCTCTGGTACTATTAACGACGCCAGGTTGCCTGCTACTATCTCCTCTGATATCACTGGTAACGCCGCAACTGCAAGTCAAATAACGGTCGGTGATACTGTAGATCTTAACATAGACTGCCGAGTTCTTCTTAGTACTGGAACTGGTACCAAGAGCGTCGTGAGTGATGGTCAGTTAAAGTTTAACGCATCCACAAACGTTCTTACCGCAGGTTCGTTCTCCGGCAGTATGGCATACTCCAACCTTACTGGAACGCCAACCATCCCAACCAACAACAACCAGTTGATTAATGGTGCTGGATATATTACCAACGCAAGCATCCCAACAGCAACTAGTGATCTAACCAACGACTCTGGTTTTATTACAGATATAACAACTCAAACTGACCCCAAGTATTTAAGATCTGATACTGCTGATACTGCTGCTGGGTCGATAACATTTACAGCAAATCCAAGATTAAACAATGACGTTAGAATAAACTTTGGAACTAGTAGTTCAATTTCATTAAGAAGGGATGCTACAAACTTAATCATGGATATCCCGAATAGTGGAACTTTCTTTATTCGTGATACTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1e96805e3b4347a9f7cdb9fa6b4b9a24caef7a7d776b8517234cb63ac5395917
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6427
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of a new cyanomyovirus promps the establishment of a new T4-like cyanophage cluster that is prevalent in the estuarine environment Liu,Y., Zheng,H., Meng,X. and Xu,Y. 2023-11-09 — GenBank