Protein

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Genbank accession
XUU32455.1 [GenBank]
Protein name
tail sheath
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,65
Protein sequence
MSIPISDLVQVDIAISPNAIATDGFGPLLFMSKEFVPSVDIYPVRSYTSLKEVLADFPGGEIAKAATTWYSQKPTPKTFLVGAIKNDTMTPATPATVTAASAGVLSTIKLETAATLQLSVSGVQYVTDPINFSSAGDFEEVATLVTTALSSVGAGVTVTQDAGKFKLTTSATGANATISNVGGKVGEVLKLQSSDNAVTVDGKNELSISSDLAAIADAPFNFFYVGLDRKYRGKSTPVDNQMSVAKWCEASSKVFGWGDSDKNILINGTNNSFRRAKNQNLRNTLCVYDASTNGDEYPEISILGRASTVNFNVANSVLTLAYKKGPGVATADLSSGQLSALLSCGGNAFISVAGNVMFYNGRMADGTWFDSVQGVEWLTQKVRLNVFNLFYTSNTKIPWTDTGVAMVNQQVTLALELAKTNGLIAPGYDNEGVFYPEGYKVISTPLELLQSQKGERIWEGTSFIAIGSGAIQGAVISGNFIQ
Physico‐chemical
properties
protein length:482 AA
molecular weight: 51017,97540 Da
isoelectric point:4,95280
aromaticity:0,08921
hydropathy:0,04938

Domains

Domains [InterPro]
IPR021808
STR
5–428
IPR021808 DC_0576
XUU32455.1
1 482
Architecture
STR
RBD
STR 5-428 | RBD 429-482
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XUU32455.1
1 482
Domain Start End Length (AA) Confidence
N-terminal 1 160 160 0,9274
Central domain 161 359 200 0,0687
C-terminal 360 482 122 0,0933
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-160
Central
161-359
C-terminal
360-482

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage vB_Shi_2KOFFS
[NCBI] 		3423637 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella sp.
[NCBI] 		625 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XUU32455.1 [NCBI]
Genbank nucleotide accession
PV615261 [NCBI]
CDS location
range 20821 -> 22269
strand +
CDS
ATGTCAATCCCAATTTCTGACTTAGTTCAGGTTGATATCGCAATCTCCCCGAACGCCATTGCGACTGATGGTTTTGGGCCATTGCTCTTCATGAGCAAAGAGTTTGTACCATCTGTTGATATATATCCAGTTCGTTCTTACACCAGTTTGAAAGAAGTTCTGGCAGATTTCCCTGGTGGCGAGATTGCCAAAGCTGCTACTACTTGGTACTCGCAGAAACCGACTCCGAAGACTTTCCTGGTCGGCGCTATCAAGAATGATACAATGACTCCGGCAACTCCTGCCACTGTTACTGCTGCATCTGCTGGCGTACTGTCAACGATTAAGCTGGAAACTGCTGCAACCCTACAGTTGAGTGTTAGTGGTGTTCAGTATGTCACTGACCCGATTAACTTCTCCTCTGCTGGAGACTTTGAAGAAGTTGCAACCCTGGTAACTACTGCACTGTCTTCTGTTGGTGCTGGTGTAACTGTTACTCAAGATGCTGGCAAGTTTAAGCTGACTACCTCTGCAACTGGCGCTAACGCAACTATCAGCAACGTTGGTGGTAAAGTTGGGGAAGTGTTGAAGCTGCAATCTTCCGACAATGCAGTCACTGTTGATGGCAAGAACGAGTTGTCTATTTCCTCCGACCTGGCTGCCATTGCGGATGCTCCATTTAACTTCTTCTATGTGGGCCTTGACCGCAAGTATCGTGGCAAGTCTACTCCGGTAGACAACCAAATGTCTGTGGCGAAGTGGTGCGAAGCATCCAGCAAAGTATTTGGCTGGGGCGACAGCGACAAGAATATTCTTATCAACGGCACTAACAACAGCTTCCGCCGTGCTAAGAACCAGAACCTGCGTAACACTTTGTGTGTTTACGATGCCTCTACAAATGGTGACGAATATCCGGAAATTTCTATTCTGGGTCGTGCATCAACTGTCAACTTTAATGTTGCAAACTCTGTCCTCACTCTGGCGTATAAGAAAGGTCCAGGTGTTGCCACTGCTGACTTATCTTCTGGTCAGTTGAGCGCACTACTTTCTTGTGGTGGTAACGCATTCATCTCCGTTGCTGGCAACGTAATGTTCTACAACGGTCGCATGGCTGACGGTACGTGGTTCGACTCTGTACAAGGTGTTGAATGGCTTACCCAGAAAGTTCGACTGAATGTGTTCAACTTGTTCTACACCTCCAATACCAAGATTCCTTGGACGGACACTGGTGTAGCGATGGTTAACCAGCAAGTAACCCTGGCGCTCGAACTCGCCAAGACTAACGGCCTCATTGCCCCTGGCTACGATAATGAAGGCGTCTTCTATCCAGAAGGCTACAAAGTTATCTCCACTCCGTTAGAACTCTTGCAGTCGCAGAAGGGCGAACGTATTTGGGAAGGTACTTCCTTTATTGCTATCGGTTCCGGTGCAATCCAGGGTGCTGTAATCTCTGGCAACTTCATTCAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ab0132318b2dc37b773066c17b79e5daa936416713e0d27e6cbedde4aa266bb5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8659
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50