Protein

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Genbank accession
QZI91838.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,60
Protein sequence
MPPVIVAVAAGAAAYAAGATVIAAVTIAAAAAALYSVATMDIPSTPGTDPSTAKQTIRTPNQPCRRIFGTAMVGGVLSFAEEYLHKGGHEEEYQTCSWRPGGHDDRGDHTCRTRTRWVDTSTKYLHLVVVLAAHEVEDILEVYFGDELKTDWDHEFWKINVMKGDQTQWEHLPKILRDVPSWTNKMVGKGIAFVHVALKHSAKHFPNGIPSIKCLVKGTKLKTPFFNGFGNNAAACIYHYLRYQFGATEKMINTASFRNEFNVSNEVMGSEPEIGHPRKHPIRYAIDGSFDYDESHQNVLKKMLSACGGNLIFTNGQYYLQVAAYRGPVSSKQVITLDNLNGPLSISPDTPLNDRINIVQGQYLDPDSAYLQADFKPVTNPAYVAEDGGEERPYDADFEYVLNKHQAHRLANIILKDNRYGLTIKAPMNLSGFKFNAGLLVGLDDKSLGYDKLEFRIVNWRLDPKGGVQLTLKQTAADIYDDSTAPVTPKPPSTNIPDSSFCYPVERVTFDTFDDDGVYDGLLWWSHPDLSNVREFEVVAASAGGEILRFNTGKDTEYRLQNMRGVVYNITITAFNLYGAPSNPVTVVTKVGDPKPVTGVVFEPDNFEVVIKPTVSGIIPQNTRFAYFRANTPVPDNKDMTRIGEGVTFTDVGLIPNTAYHYFIQPLNGAAMGDLFGPYGTKTTDNPSDIYDLIKDEIPGTFTWVVYATDAFGAGISKTFDPAKHNFEGRAYNKAVEEPSLNPLDYTFFRIGEFISDAEQTILDNLKLGKTPDGTDDLVGEVAVKTIAAQEVNALKVLADWVKAHNIAAGAITADKIAVTVVAPVNNFTQFGDLRGWTVPSDSNLVDEVLLQSRKVKTLKIISGSVDKAATADKFSVDHNSIYEVRIALYSDQSTAATEQQFSMQSFDAKGSVVYTKAYHASTRRQAGSETTLEFWKGSVSGGLWRHMVVYIVGANADINAMPDCANVTYFAKLTPDVRDVSISAIALGSGNASTVHVYSPSVISVGSGVLSAFVIRAGALITSPKIVGGIVEGGVIKGGRIEGTTGEFEGTVKVGKLVGGVGLTSWGALELGWRMSWSVNGTPYKLIPKVRIRIPKEDFKRKGIITLYLSDVKASRDIRDRTAEGSGQGFNSLKLSASSAISVGGRIVDSNKTPTKVTGASNSLVMQRASGVLDPISLTYGITIDASAPNDKGVHDFYLCIHGDAGTKRLNYAFSIGWNATNATVILDKDNSDIIMSG
Physico‐chemical
properties
protein length:1239 AA
molecular weight: 134771,71930 Da
isoelectric point:6,01887
aromaticity:0,09443
hydropathy:-0,17054

Domains

Domains [InterPro]
DC_0187
STR
1–1022
DC_0187 DC_2102
IPR032876
ATT
295–460
IPR032876 IPR003961
IPR036116
STR
523–684
IPR036116
QZI91838.1
1 1239
Architecture
STR
ATT
STR
RBD
STR 1-294 | ATT 295-460 | STR 461-1022 | RBD 1034-1211 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QZI91838.1
1 1239
Domain Start End Length (AA) Confidence
N-terminal 1 927 927 0,6871
Central domain 928 1126 200 0,1271
C-terminal 1127 1239 112 0,9972
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-927
Central
928-1126
C-terminal
1127-1239

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 51E28.4
[NCBI] 		2859335 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio crassostreae
[NCBI] 		246167 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI91838.1 [NCBI]
Genbank nucleotide accession
MW824400.1 [NCBI]
CDS location
range 22732 -> 26451
strand +
CDS
ATGCCACCAGTAATTGTTGCGGTTGCGGCAGGTGCCGCTGCCTACGCTGCGGGTGCTACGGTAATTGCTGCGGTAACTATCGCGGCTGCTGCGGCTGCTCTGTATTCCGTAGCCACCATGGATATCCCTAGCACTCCCGGTACTGACCCATCAACGGCCAAGCAAACCATACGAACACCTAACCAACCCTGTAGGCGGATATTCGGTACGGCCATGGTAGGCGGGGTATTGTCTTTTGCAGAAGAGTACCTACACAAAGGAGGTCATGAAGAAGAGTATCAAACCTGTAGTTGGCGTCCTGGTGGTCACGACGATCGTGGTGACCACACCTGTAGGACCAGAACCCGTTGGGTAGACACTAGTACCAAGTATTTACACTTGGTCGTTGTTCTAGCGGCACACGAAGTTGAAGACATACTTGAAGTGTACTTTGGTGATGAACTAAAAACAGACTGGGATCACGAGTTCTGGAAAATTAACGTCATGAAAGGCGATCAGACACAGTGGGAACATTTACCGAAAATACTTCGTGATGTGCCGTCTTGGACTAACAAGATGGTAGGCAAGGGTATTGCGTTCGTCCACGTAGCGCTTAAGCACAGTGCAAAACATTTCCCTAACGGCATACCAAGCATCAAGTGTTTGGTAAAAGGTACCAAATTAAAAACACCATTCTTCAACGGTTTTGGTAATAACGCTGCGGCTTGTATTTATCACTACTTGCGCTACCAGTTTGGTGCTACAGAGAAGATGATAAACACGGCATCTTTCAGAAACGAGTTCAATGTTTCTAATGAAGTTATGGGTAGTGAGCCAGAAATAGGTCACCCACGTAAACACCCAATTCGTTACGCTATTGACGGATCCTTTGATTACGATGAAAGTCACCAGAACGTTCTTAAGAAGATGCTTTCTGCTTGTGGCGGTAACCTAATATTTACCAACGGCCAGTACTACCTTCAGGTTGCTGCTTATCGTGGTCCAGTCTCGTCTAAGCAAGTGATCACGTTAGATAACTTGAATGGACCGTTAAGCATTTCACCAGATACACCACTTAACGACAGAATTAATATCGTTCAAGGTCAGTATTTAGACCCAGATTCCGCGTACCTTCAAGCTGACTTTAAACCGGTAACTAACCCTGCTTACGTTGCTGAAGATGGCGGCGAGGAAAGACCTTACGACGCAGACTTCGAATATGTTCTTAACAAGCATCAAGCACACAGACTGGCTAACATCATCTTAAAAGATAACCGCTACGGGCTGACTATCAAAGCGCCTATGAACCTAAGTGGTTTCAAATTCAATGCAGGCTTGTTGGTTGGTTTAGATGATAAATCGTTAGGCTATGACAAGCTTGAGTTTCGCATTGTTAACTGGCGTCTAGACCCTAAAGGTGGTGTGCAACTTACACTTAAACAAACTGCAGCCGACATCTATGATGACTCGACAGCACCAGTGACGCCTAAGCCGCCTTCTACCAATATCCCAGACTCAAGTTTCTGCTACCCAGTAGAACGGGTAACTTTTGACACGTTCGACGATGATGGCGTTTACGATGGCCTACTTTGGTGGTCTCACCCTGACTTGTCTAACGTTCGTGAGTTCGAAGTGGTTGCTGCTTCTGCAGGCGGTGAGATACTAAGATTCAATACGGGTAAAGACACTGAGTACCGATTACAGAATATGCGCGGTGTGGTTTACAACATCACAATCACAGCATTTAACTTATACGGTGCACCGTCTAATCCGGTCACTGTCGTAACGAAAGTGGGCGATCCTAAACCTGTCACTGGTGTAGTGTTCGAACCAGACAACTTCGAAGTGGTTATTAAGCCTACCGTGTCTGGCATTATTCCACAGAATACACGCTTTGCTTATTTCAGAGCCAACACACCTGTACCAGACAACAAGGATATGACAAGGATTGGCGAAGGTGTGACGTTTACGGACGTTGGGCTTATCCCTAACACGGCTTACCACTATTTCATTCAACCGCTTAATGGCGCTGCCATGGGTGATCTGTTTGGCCCGTATGGTACTAAGACTACGGATAACCCTAGCGACATTTATGATCTGATAAAGGACGAAATACCAGGGACATTCACTTGGGTGGTTTATGCAACTGACGCTTTTGGTGCGGGTATCAGCAAGACGTTTGACCCTGCTAAGCACAACTTCGAAGGTCGCGCATATAACAAGGCAGTCGAAGAGCCTAGCTTAAATCCGTTGGATTACACGTTCTTCCGCATTGGTGAGTTCATTAGCGATGCAGAACAGACGATTCTTGACAACTTGAAGTTGGGTAAAACTCCTGACGGCACTGACGATTTGGTCGGTGAGGTGGCGGTTAAAACCATTGCCGCACAAGAAGTTAATGCGCTTAAAGTTTTAGCGGATTGGGTTAAGGCTCATAACATAGCAGCAGGGGCAATAACAGCCGACAAAATAGCGGTCACTGTGGTAGCACCAGTCAACAACTTCACTCAATTTGGAGACTTGAGAGGTTGGACAGTGCCTTCCGACTCTAACCTGGTTGATGAAGTTCTTTTGCAAAGTAGGAAGGTTAAAACCCTCAAGATCATTAGCGGAAGTGTTGACAAAGCGGCAACTGCCGACAAGTTCTCTGTTGACCACAACTCTATTTACGAAGTTCGTATCGCTCTGTATTCAGACCAATCTACCGCTGCAACTGAACAACAGTTCAGTATGCAGTCATTTGATGCGAAAGGGTCTGTGGTATACACAAAGGCGTACCATGCCTCCACTAGAAGACAGGCAGGAAGCGAGACTACTTTAGAGTTTTGGAAGGGTTCTGTCTCTGGCGGGTTGTGGCGTCATATGGTTGTTTATATTGTAGGAGCTAACGCAGACATTAACGCAATGCCTGACTGTGCCAACGTCACTTACTTTGCCAAGCTTACCCCTGATGTAAGGGATGTAAGCATATCGGCTATAGCGTTAGGTAGTGGAAACGCCAGTACGGTTCACGTCTACTCACCGTCAGTGATATCAGTAGGAAGTGGTGTTCTGTCCGCGTTTGTAATTAGGGCAGGCGCTTTAATAACTTCGCCTAAGATTGTAGGTGGTATAGTAGAAGGTGGTGTGATCAAAGGTGGCCGTATCGAGGGTACGACGGGCGAATTCGAAGGTACTGTTAAAGTTGGTAAGCTTGTCGGTGGTGTTGGTTTGACCAGTTGGGGAGCATTAGAACTTGGTTGGCGTATGAGTTGGTCTGTAAATGGCACCCCATATAAACTCATACCTAAAGTTAGAATTAGAATACCCAAAGAAGACTTTAAAAGAAAAGGGATAATCACTCTATACCTTTCAGACGTAAAAGCCAGTCGTGACATTAGGGACAGAACAGCAGAAGGTTCCGGTCAGGGTTTTAACTCTCTTAAACTCTCTGCCTCTTCGGCTATTAGTGTGGGTGGGCGTATTGTAGATAGTAACAAAACACCAACTAAAGTTACTGGTGCCAGCAACTCATTGGTTATGCAGAGAGCGTCAGGCGTATTAGACCCGATCTCATTAACATACGGAATTACGATAGACGCGTCTGCACCGAATGACAAAGGTGTGCACGACTTTTATTTGTGCATTCACGGTGATGCAGGTACTAAGAGGCTGAACTACGCATTTAGTATTGGTTGGAACGCTACTAACGCCACGGTCATCTTGGACAAGGACAACAGCGACATCATAATGAGTGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6c944b2aa1fb52512767df5bca8e6fda97568a61fdb30306aebedf014fb51552
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2848
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50