Protein

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Genbank accession
WBC28522.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MNALRPFASLSLNNPSQITSYKPLISYDTWQLIRSDDYVTDGVELTNLDLTTWDFSTGQDSVQIDSNSFAYIPDWSLATETPRLINNNNGLYFKAGNTYMVKIDAVAGTAGRVSFYAYAQNIGEVHGYESGEKTFTFTADTNGYLQTLWYTMDGAEYDGRIKIKSIQKVIQEPSKRYAVDKGTSPKYPLALHSGQGVKFNGIDQCVSGGTWNDIGITTNPTGFTISCFVSGGTRQIWNTGYESSYNGIGLVKVNATTYRVNSNSTENSPLTFTFQDTGVITLTWNDGLVSMYGNGELLATQQFIYTTPFLFSVYEVLSIGAYRLSSSYFSGIINNVIVVDDGVLTPEQIAYQYNNPERFLYREDNVLKSAILTQSEIDNVVAYLPMCEKDNYVRDLVGYSEGVELNTYSSFIPAGTQTLNGTEITFNGQPNSNIRVSVPSQTDGTLYKISLDVTSYTSGYLEYNLCGNNRSVDSISGVGSFSFVTNSVGDSNFLFYLQEDSTIGFNGVVDNLSIKQLSGIYPIEEATSECRDDAQNLQYGLQTSKLARDSLGVPTALSDYFECDDVAYGNTGKSFDNTKDFVIYGVVKFDDIGAEQAHGTAYNGATTRVTIGSSGDGRILARLGSETKATVGVGDAFTPFFFCIKRIDATDTMQFKINDVQIGSDSVSTFTESMEWVFGRQGIYSTYKSSGEVRMWETDNILTTDEYDTKEYNKAVSKGLLT
Physico‐chemical
properties
protein length:722 AA
molecular weight: 79555,03690 Da
isoelectric point:4,46126
aromaticity:0,12188
hydropathy:-0,27313

Domains

Domains [InterPro]
IPR013320
STR
193–357
IPR013320
WBC28522.1
1 722
Architecture
STR
STR 193-357 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WBC28522.1
1 722
Domain Start End Length (AA) Confidence
N-terminal 1 49 49 0,9298
Central domain 50 248 200 0,4388
C-terminal 249 722 473 0,7072
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-49
Central
50-248
C-terminal
249-722

Taxonomy

  Name Taxonomy ID Lineage
Phage Thiohalocapsa phage LS06-2018-MD03
[NCBI] 		3003841 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBC28522.1 [NCBI]
Genbank nucleotide accession
OP947165 [NCBI]
CDS location
range 25492 -> 27660
strand -
CDS
ATGAACGCTTTGCGACCTTTTGCATCTTTGAGTTTAAACAATCCGTCTCAGATTACGTCATATAAGCCTCTAATATCTTATGACACTTGGCAGTTAATTAGAAGTGACGATTATGTTACTGATGGTGTGGAGCTAACTAATTTAGATTTAACTACATGGGATTTTTCAACAGGGCAAGACTCAGTGCAGATAGACAGCAATAGTTTTGCTTATATACCCGATTGGAGTCTAGCAACTGAAACACCGAGACTCATAAACAATAATAATGGGTTATATTTTAAGGCAGGCAACACATATATGGTTAAAATAGATGCTGTAGCTGGTACTGCTGGTCGTGTGAGTTTTTATGCTTACGCTCAAAATATAGGTGAAGTTCATGGCTATGAGTCGGGTGAAAAAACATTCACATTCACTGCGGATACAAACGGTTATTTGCAGACACTATGGTACACAATGGATGGTGCTGAGTATGATGGAAGAATAAAAATTAAGTCTATCCAAAAAGTAATCCAAGAACCAAGCAAAAGATATGCAGTCGACAAAGGTACTTCACCTAAATATCCATTAGCTTTGCATAGCGGTCAGGGTGTTAAGTTTAATGGGATTGACCAATGCGTGAGTGGAGGTACTTGGAATGATATAGGAATAACTACTAACCCTACTGGATTCACTATTAGTTGCTTCGTTAGCGGAGGTACTAGACAAATATGGAATACAGGCTATGAGAGTAGCTATAATGGGATAGGTTTGGTGAAAGTAAATGCCACGACTTACCGTGTAAACTCAAACAGCACTGAAAATTCTCCCTTAACTTTCACATTCCAAGACACGGGAGTTATTACCTTAACTTGGAATGACGGGCTAGTGTCAATGTATGGTAATGGAGAATTACTAGCAACCCAGCAATTCATTTACACAACTCCATTCTTATTCTCTGTATATGAGGTATTATCAATAGGAGCTTATAGGTTGTCAAGTTCCTATTTTTCAGGCATTATCAATAATGTTATTGTAGTTGATGATGGTGTTTTAACCCCAGAACAAATAGCCTATCAATATAATAACCCTGAGAGGTTCTTGTATAGAGAAGATAACGTACTTAAATCAGCTATCTTAACTCAAAGCGAAATTGATAATGTCGTAGCTTACTTACCTATGTGTGAGAAAGATAATTATGTTCGGGATTTGGTTGGTTATAGTGAGGGTGTGGAGTTAAATACTTACTCTAGCTTTATCCCCGCAGGGACGCAGACCTTAAATGGAACAGAAATAACATTCAACGGTCAACCAAACAGCAATATAAGAGTATCTGTACCTTCGCAGACAGATGGAACTCTATACAAAATATCCTTAGATGTCACTTCTTATACAAGTGGGTATTTAGAGTATAATTTATGTGGAAATAATAGAAGCGTTGATTCTATTTCAGGTGTAGGTTCTTTTTCGTTCGTTACAAACTCTGTAGGTGACTCTAATTTCCTTTTCTACTTACAGGAAGATTCCACTATTGGTTTTAATGGTGTCGTAGACAACTTATCTATAAAACAACTCTCAGGCATCTATCCAATAGAAGAAGCTACAAGCGAATGTAGAGATGATGCACAAAACTTACAATATGGCTTACAGACCTCTAAGTTAGCAAGAGATTCGCTAGGTGTACCGACTGCACTTAGTGATTATTTTGAATGTGATGATGTTGCTTATGGAAACACAGGAAAGTCATTTGACAACACTAAAGATTTTGTAATCTACGGAGTTGTTAAATTTGATGATATTGGAGCAGAACAAGCACATGGAACTGCTTACAATGGAGCTACAACAAGAGTCACAATAGGGTCTAGTGGTGATGGAAGGATATTAGCTCGCTTAGGAAGTGAGACTAAAGCTACGGTAGGTGTGGGTGATGCTTTTACACCTTTCTTTTTTTGTATTAAAAGAATAGATGCAACAGATACTATGCAGTTTAAAATCAATGATGTTCAGATAGGTTCTGATTCTGTATCTACTTTTACTGAGTCTATGGAGTGGGTATTTGGTAGGCAAGGGATATATAGTACATACAAATCTTCAGGTGAAGTTAGAATGTGGGAAACAGATAATATTTTAACTACAGACGAATATGATACTAAAGAATATAACAAAGCTGTAAGCAAAGGATTATTAACATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
0ee1091ef4d9d15e09a49c3556c2faa2694d081ae24637cf3f25fcfcbc7ea3b4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6796
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Horizontal gene transfer and CRISPR targeting drive phage-bacterial host interactions and co-evolution in pink berry marine microbial aggregates Kosmopolous,J.C., Campbell,D.E., Whitaker,R.J. and Wilbanks,E.G. — — GenBank