Protein

View in Explore
Genbank accession
ACY76234.1 [GenBank]
Protein name
predicted protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,72
Protein sequence
MASVTQTIPTLTGGLSQQPDELKIPGQVSVANNVIPDVTHGLLKRPGGKLVASISDNGTAALNSQTNGKWFSYYRDETESYIGQVSRSGDINMWRCSDGQAMTVNYDSGTATALTTYLTHTNDEDIQTLTLNDYTFLTNRTKTVAMSSTVEPVRPPEVFIDLKATAYARQYAVNLFDNTTTTAVSTVTRIDVELIKSSNNYCDSNGAMVARTSRPSNSTRCDDSAGDGRDAYAPNVGTKVFNVTDGASLTDEANSGSYTYTIDVKDSSNNSVNRGVNLYFRIRTVGQSVPFTTGSGSSATTTYQARYTTTFDLLYGGTGWQEGDYFYVWMKDGYYKITVEAISTANVQANLGLIRPNPTPFDTETAVTAESIIGDIRTAIIATGNFTSANVQQIGTGLYVTRPSGTFNVTAPSSDLLRVMSGEVANVDDLPSQCKHGYVVKVANSEADADDYYVKFFGHNNRDGDGVWEECAKPSRNIEFDKGTMPIQLVRQANGTFTVSQATWQNAEVGDELTNPNPSFVGKTINQLVFFRNRLVFLSDENVIMSRPGEFFNFWSKTATTFTPQDVIDLSCSSTYPAIVYDGIQVNAGLLLFTKNQQFMLTTDSDILSPETAKINAVSSYNFNEKTHPVSLGTTVAFIDNANQFTRFFEMSNVVRQGEPDVVDQSKVISRLLDKNISLVSVSRENSVVFFSQKDTDKIYCFRYFTSGEKRLLQAWTTWTITGNIQYHCMLDDALYVVTRNNNKDQIVKYSLKLDDAGHFVTDTQGTTSTDDDSIYRVHLDHSSSVTAASNTYNTTTIKTTIPKPNGYESTKQLVAYDTDAGNDLGRYALVTVSGSNLEIPGNWSNNSFIIGYLYEMDVQLPTLYVTQQVGDKYRSDAKSSLIVHRIKFSFGPLGVYSTTIQRDGKPDFTETKELGLAGVVGASRLPIVPEVIETVPCYERNTNLKVNVKSEHPAPATLYSLAWEGDFTNRFYKRV
Physico‐chemical
properties
protein length:976 AA
molecular weight: 107595,24940 Da
isoelectric point:5,06637
aromaticity:0,10041
hydropathy:-0,34744

Domains

Domains [InterPro]
IPR058003
TTP
1–192
IPR058003 IPR058003
IPR058003
TTP
1–185
IPR058003 DC_1232
ACY76234.1
1 976
Architecture
TTP
STR
TTP
TTP 1-184 | STR 185-370 | TTP 371-974 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ACY76234.1
1 976
Domain Start End Length (AA) Confidence
N-terminal 1 150 150 0,8126
Central domain 151 367 218 0,8681
C-terminal 368 976 608 0,3141
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-150
Central
151-367
C-terminal
368-976

Taxonomy

  Name Taxonomy ID Lineage
Phage Tiamatvirus PSSP7
[NCBI] 		268748 No lineage information
Host Prochlorococcus
[NCBI] 		1218 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACY76234.1 [NCBI]
Genbank nucleotide accession
GU071093 [NCBI]
CDS location
range 21836 -> 24766
strand +
CDS
ATGGCAAGTGTTACTCAAACAATACCTACACTGACTGGTGGTTTATCTCAACAGCCAGATGAACTGAAGATTCCTGGACAAGTTAGTGTCGCTAATAATGTGATCCCTGACGTAACACATGGTTTATTAAAGCGTCCAGGAGGGAAGTTAGTTGCATCTATTAGTGATAATGGAACCGCAGCTTTAAATTCACAAACTAACGGTAAATGGTTTTCCTATTATCGTGATGAAACAGAAAGTTATATAGGACAAGTTTCTAGATCGGGCGATATAAATATGTGGAGATGTAGTGATGGTCAAGCAATGACTGTTAACTATGACTCAGGTACTGCTACTGCTTTAACTACATATCTCACACATACAAATGACGAAGATATACAAACACTAACTCTTAATGACTATACATTTTTAACTAACAGAACTAAGACAGTAGCTATGTCTTCAACAGTTGAACCTGTTAGACCCCCTGAAGTTTTTATAGATTTAAAAGCTACAGCTTATGCAAGACAGTATGCAGTTAATTTATTTGATAACACGACTACTACAGCTGTCTCAACTGTAACGAGGATAGATGTTGAACTTATTAAATCAAGTAATAATTATTGTGATAGTAATGGAGCTATGGTTGCTCGCACTAGCCGCCCTTCAAACTCGACTAGATGCGATGACAGTGCTGGTGATGGTAGAGATGCTTATGCTCCTAACGTTGGGACTAAAGTATTTAACGTAACAGATGGAGCTAGTCTGACCGATGAAGCAAATTCTGGAAGTTATACATATACTATTGATGTTAAAGATTCCAGTAATAATTCAGTTAATAGAGGAGTAAACCTATACTTCAGAATTAGAACTGTAGGACAATCAGTTCCATTCACAACTGGTTCCGGTAGTAGTGCAACAACTACATACCAAGCTCGTTATACAACAACTTTTGATCTCTTATATGGTGGTACAGGGTGGCAAGAAGGTGATTATTTCTACGTTTGGATGAAAGATGGTTATTACAAAATAACTGTTGAAGCAATTAGTACAGCAAATGTACAGGCAAACTTAGGATTAATTAGACCTAACCCAACACCATTTGATACAGAAACAGCAGTAACAGCTGAATCAATTATTGGTGATATTCGTACAGCTATTATTGCGACTGGTAATTTTACTTCTGCAAATGTTCAACAGATTGGAACTGGTTTATATGTAACTAGACCTTCCGGAACATTTAACGTTACAGCTCCTTCAAGTGATCTGCTAAGAGTTATGTCTGGTGAGGTAGCGAATGTAGATGATTTACCTTCTCAATGTAAGCATGGATATGTTGTAAAAGTTGCTAATAGTGAAGCAGATGCAGACGATTACTACGTTAAATTCTTTGGTCATAACAACAGAGATGGAGACGGAGTATGGGAAGAATGTGCAAAACCAAGCAGAAATATAGAGTTTGATAAAGGCACTATGCCTATCCAATTAGTTAGACAGGCTAATGGAACATTTACTGTTTCACAAGCTACTTGGCAAAATGCTGAAGTGGGGGATGAATTAACTAATCCCAATCCTTCTTTTGTTGGTAAAACAATAAATCAATTAGTTTTCTTTAGAAATAGATTAGTCTTCCTAAGTGATGAAAACGTAATCATGTCAAGACCTGGCGAGTTTTTTAACTTCTGGTCTAAGACTGCTACTACCTTTACACCACAAGATGTTATAGATCTTTCCTGTAGTTCTACATACCCAGCAATTGTGTATGACGGTATTCAGGTTAATGCTGGATTATTGCTATTTACTAAAAATCAGCAGTTTATGCTGACTACAGACAGTGATATTTTAAGTCCTGAAACTGCAAAGATTAATGCAGTATCATCCTATAACTTCAATGAAAAAACACATCCTGTTTCTTTAGGCACTACTGTTGCATTTATAGATAATGCTAATCAATTTACTAGGTTCTTTGAAATGTCTAATGTTGTTAGACAGGGTGAACCTGATGTAGTTGATCAAAGTAAAGTTATCTCAAGATTATTAGATAAAAATATCAGTTTAGTTTCAGTATCCAGAGAAAATTCAGTTGTATTCTTTAGTCAAAAAGATACAGATAAAATCTATTGTTTTAGATATTTTACTTCTGGAGAGAAACGTTTATTACAAGCTTGGACTACATGGACAATAACAGGAAATATTCAATATCACTGTATGTTAGATGATGCTTTATACGTTGTTACTCGTAATAACAATAAAGATCAGATTGTTAAATATTCTCTAAAGCTTGATGATGCTGGACATTTTGTAACTGATACACAAGGCACTACCAGTACAGATGATGACAGTATTTATAGAGTTCATTTAGATCACTCTTCCTCTGTTACAGCTGCATCAAATACTTATAACACTACAACTATTAAAACTACAATTCCAAAACCTAATGGATATGAAAGTACAAAACAGTTAGTAGCTTATGATACTGATGCTGGAAACGATTTAGGTAGATATGCATTAGTTACTGTATCTGGTTCTAATTTAGAAATTCCAGGAAATTGGTCAAACAACTCTTTTATAATTGGTTATCTATATGAGATGGATGTACAACTTCCAACCTTATATGTAACTCAACAAGTAGGAGATAAATATAGATCTGATGCTAAATCCTCACTTATTGTACATAGGATAAAGTTTAGTTTTGGACCTCTTGGAGTTTATTCAACAACTATACAAAGAGATGGGAAACCAGATTTTACTGAAACAAAGGAGTTAGGACTAGCTGGCGTTGTAGGCGCAAGTAGATTACCAATTGTTCCTGAAGTAATAGAAACAGTTCCTTGTTATGAGAGAAATACAAACCTAAAAGTAAACGTTAAATCAGAACATCCAGCACCAGCCACACTTTATTCACTGGCATGGGAAGGAGACTTTACAAATAGATTTTATAAACGTGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
07a17fe08b0b5a80dcb0a2c69133dd6581abe0e8ee93a5964edf95ebe81f936c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7716
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Prochlorococcus phage P-SSP7 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Richards,J., Rizzolo,K., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank