Protein

View in Explore
Genbank accession
PQ642266.1|protein_5|PQ642266.1_CDS_[6753..10631] [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,70
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MATLKQIQFKRSKTAGARPAASVLAEGELAINLKDRTIFTKDDSGNIIDLSISAGGNISGNITQTGDYLQNGTYNLNGNQFVYAGKYIEFLPKTAGNGAWANQHLNKAPIFTDLSSTTSVSEYHPLIKQRYKDGTFSVGTLVNEGSFKIHYINESGTSKYWTFRRDGGFVVDTGSLTVTDGNISASGNINSATGVVSAPQINTKTIVFDTKAFGQYDSQSLVQYVYPGTGETNGINYLRKFRAKSGGTIYHELASAQTGKSDELSWWTGNTAVNKQMGLRNDGSLVLRRSLAIGTITTDENINNYGSTGAMGECYIVIGDAATGVSYKRSGVYDLVANGLSIASITPDSFRSTRKALFGRSEDQGGTWIMPGTNAAFLSVQTQADENAAGDGQTHIGYNSGGKMNHYFRGKGKTNINTQEGMEVNPGILKIVTGANNVMFYADGGITSTKQLSIYNGVYLAANNSTAGLTFAPTTTIDGTKQILWEGGTRAGQNKSYVTVKAWGNSFNASGDRNRETVFEVADGQGYYFYAQRVAPASGSTTGVIQFRIAGALLTGGGITSSGSIVTESSLVANNGLSVNGQAKFGGTADALRIWNAEYGAIFRRSETNFYIIPTLQNAGESGGISNLRPFTINLANGSVMMGNHTQAGKNLLTIDNVSKFVQTDVRLRVNMDSDAIVVNASSQAASNFIQGRKADVTKWYLGIGDGGNVVRMHNYTYSHGIALNSDTVDITKPLKINDIRIGTDGNITGGTGNFANLNTTLNRKTNVGGWAGSSVDGWYKFATVTIPQGTGTVTFKISGGAGFNFKSYSQASVAEIVLRTGNNNPKGINAVLWNRSDLSFNQIATMNTSGDTYDVYVFCAGYTNALVVEYSCSENSSVTVVGLNGGIQPVVDTLPEGHVVGKTVRLLNNIGGTFAAGESNIVTRGEYVTDNQKGMRIKSNGNNIGSNAALIRNDGGSFYILATDKNTEEKPDAANGDWNGLRPFSINMTDGRVGMNHGLNITGGGLNVTGGNTNLGNISSRLVSYARAPSGWGDTSDTMKSKITFMADHGDLSNSGSYYPIVGAWSNYGSAGYRQTFEFGWVGSGRRAGWRDGIIRIRGDNANGQQARWRFTMDGTLDCPGKVLLPQTGAFGVNTSNGLGGNSITFGDNDTGIKQNGDGLLDIYANSVQVFRFQNGDLYSYKNINAPNVYIRSDIRLKSNFKPIENALDKVEKLNGVIYDKAEYIGGEAIETEAGIVAQTLQDVLPEAVRETEDSKGNKILTVSSQAQIALLVEAVKTLSSRVKELESKLM
Physico‐chemical
properties
protein length:1292 AA
molecular weight: 137972,75070 Da
isoelectric point:8,57167
aromaticity:0,08901
hydropathy:-0,30805

Domains

Domains [InterPro]
DC_1954
STR
1–1291
DC_1954
PQ642266.1|protein_5|PQ642266.1_CDS_[6753..10631]
1 1292
Architecture
STR
STR 1-1291 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage SH-1
[NCBI] 		3390847 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
PQ642266.1_CDS_[6753..10631] [NCBI]
Genbank nucleotide accession
PQ642266.1 [NCBI]
CDS location
range 6753 -> 10631
strand +
CDS

  




        

        
      
    
  






  

  
  

    
Genome Context

  


  

    

      
Genome Context

      

    

  


  

  


  

  

  
  

  


  

    
Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
78693ddde5a299f31fd1a0f4da4c93e473ab60fdb5f7a07b19c9ec19d2475ed1

                    

                    
                      AlphaFold3
                    
                  

                  

                  

                    

                      Source
                      AlphaFold3
                    

                    

                      Method
                      AlphaFold3
                    

                    

                      Resolution
                      0,8538
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50