Protein

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Genbank accession

XYO02585.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence GenBank

Probability 1,00

Protein sequence

MATLVTQDFEREIAEKTVNGGVIQYDEFIFAMIPNLSEDNLAQHLTIPEKGLIKHRQAVSKAGVINENAVVYSVTLGTEIGDFDFNWIGLINKRTNKLAVAVQADTIKKTRNKNNVQGNSLTRNVLLEFAGAKQLTQINVRADTWQIDFTVRLHGIDEKIRLTNRDLYGRAVFFDDAFLVKRGAGNNYTIDAGHAYIEGVRAEIKQAQTIQAASLPCSIYLDVVHHCTVTGAYETEIKFLKQSKSDYLDTANKQHYVQIIADIDRSGAVTDRRLLSPWFGITPKDLDDTTTSTRDKTGHTHRLPLASLIKKGLVQLYSGIDSNSEELAATPKAIKTLKGFIDSIMRSLNNYIPNSKKSSAVDSNSEDTIGTSKAVKIAYDRAVEAEKKGMPVGAVVAFSKEIENVFGYLKCTGATFSELTYPDLYRALGNKNKTPNLQRSDVGMTAFFSVDDIPEGWIYFDDVKTQVTQSTYPELYKHLVKKYGSISQVPYVEDRFIRNTGNGLSVGQKQSDAIRNITGRFGPLDNSISSGLKGMLDGPFYLINEERHFGLNADWNGNNPLVGFDISRVVPTADENRPKSIVMKFCIKAVNTFDDVVFWIKAYGVVENTGALNAGNLARDIQQVSVKTQQLEESFNKNKEQTSLKIQAIERQLNENNQGSVVWSGNVTQHSTNIIELSESILNKTLIFYLQVSQSHSLSQNFNVHTASLFIDKSILNATGRKYCHTGLYIGGWKNCQIEVIDGNRIRVIDISGMYLKKITVI

Physico‐chemical properties

protein length:	762 AA
molecular weight:	84883,12590 Da
isoelectric point:	8,21735
aromaticity:	0,08530
hydropathy:	-0,30013

Domains

Domains [InterPro]

IPR022225
ATT
3–157

IPR022225 DC_1854 IPR005068 SSF88874 SSF88874 DC_0818

IPR022225
ATT
3–150

IPR022225 IPR005068 IPR037053 SSF88874

DC_1651
STR
332–439

DC_1651

XYO02585.1

1 762

Architecture

ATT

STR

ATT

STR

RBD

ATT 3-157 | STR 284-388 | ATT 389-440 | STR 442-590 | RBD 591-762

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR022225	ATT	DC_0271	3	157	InterPro cluster	Phage tail fibre protein, N-terminal domain	Central	Medium	Text match	271 proteins / 271 hits
IPR022225	ATT	DC_0271	3	150	InterPro cluster	Phage tail fibre protein, N-terminal domain	Central	Medium	Text match	271 proteins / 271 hits
DC_1854	STR	DC_1854	284	345	Novel HMM	DC_1854	Central	Low	Positional only	40 proteins / 40 hits
IPR005068	STR	DC_0738	307	337	InterPro cluster	Bacteriophage lambda, Tail fiber protein, repeat-2	Central	High	Text match	217 proteins / 347 hits
DC_1651	STR	DC_1651	332	439	Novel HMM	DC_1651	Central	Low	Positional only	94 proteins / 94 hits
IPR005068	STR	DC_0738	358	386	InterPro cluster	Bacteriophage lambda, Tail fiber protein, repeat-2	Central	High	Text match	217 proteins / 347 hits
SSF88874	STR	SSF88874	388	437	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR037053	ATT	IPR037053	389	440	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
SSF88874	STR	SSF88874	442	589	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
SSF88874	STR	SSF88874	442	590	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
DC_0818	RBD	DC_0818	590	762	Novel HMM	DC_0818	C-terminal	Low	Positional only	11 proteins / 11 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Pasteurella phage Pmp6 [NCBI]	3127682	Viruses >
Host	Pasteurella multocida [NCBI]	747	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pasteurellales

Coding sequence (CDS)

Genbank protein accession

XYO02585.1 [NCBI]

Genbank nucleotide accession

OR544137.1 [NCBI]

CDS location

range 24110 -> 26398
strand +

CDS

ATGGCGACTTTAGTCACACAAGATTTTGAGCGCGAAATCGCAGAAAAGACAGTAAACGGCGGCGTGATTCAGTACGATGAATTTATTTTTGCGATGATTCCGAATCTATCTGAAGATAACTTGGCGCAGCATTTAACAATCCCCGAAAAAGGGTTGATTAAACACAGACAGGCAGTGAGCAAAGCGGGCGTGATTAATGAAAATGCGGTTGTTTATTCTGTAACGCTTGGCACGGAGATCGGCGACTTTGATTTTAACTGGATCGGACTGATCAACAAGCGCACGAATAAGTTAGCGGTTGCAGTACAAGCGGACACAATCAAGAAGACACGCAACAAAAACAACGTACAGGGCAACAGTTTAACGCGCAACGTTTTATTAGAGTTTGCTGGCGCTAAACAGCTCACACAAATCAACGTGAGAGCCGATACTTGGCAGATCGATTTTACAGTGAGATTGCACGGAATTGATGAAAAAATCCGTTTAACAAATCGTGATCTTTACGGTCGCGCGGTGTTTTTTGATGACGCGTTTTTAGTGAAACGCGGCGCTGGCAATAACTACACAATCGACGCGGGTCACGCGTATATTGAAGGCGTGCGTGCAGAGATTAAACAAGCGCAGACAATTCAAGCGGCGTCGCTCCCCTGTTCGATTTATTTAGACGTTGTTCATCATTGCACGGTAACAGGCGCATACGAAACAGAAATCAAGTTTTTAAAACAATCGAAAAGCGACTATTTAGACACAGCAAACAAGCAACACTATGTACAGATTATCGCAGATATTGATCGTTCTGGCGCAGTCACAGATCGCCGCTTATTATCGCCGTGGTTCGGTATTACACCAAAAGACTTAGATGACACAACAACAAGCACGCGCGACAAAACGGGACATACGCACAGATTGCCGCTTGCAAGCCTGATTAAAAAAGGGCTTGTGCAACTGTATTCAGGAATAGATAGCAATAGTGAAGAATTAGCAGCAACGCCTAAAGCAATCAAAACACTAAAAGGCTTCATTGATTCAATTATGCGCAGTTTAAATAACTACATTCCGAATAGTAAAAAATCATCAGCAGTTGACAGCAACAGCGAAGATACAATCGGCACAAGTAAAGCTGTAAAAATTGCGTATGATCGCGCAGTAGAGGCAGAGAAAAAGGGGATGCCAGTGGGTGCAGTTGTAGCTTTTTCAAAAGAAATTGAGAATGTTTTTGGCTATTTAAAATGTACAGGTGCGACTTTCTCTGAATTAACGTACCCAGATCTTTATAGAGCACTTGGTAATAAAAATAAAACGCCGAATTTACAGCGATCTGATGTCGGCATGACTGCTTTTTTTTCAGTCGATGATATTCCTGAAGGGTGGATTTATTTTGATGATGTTAAAACACAAGTGACGCAATCAACATATCCAGAACTTTACAAGCATTTAGTTAAAAAATATGGATCTATTTCCCAAGTTCCGTATGTTGAAGATAGATTTATTCGTAATACAGGAAATGGATTAAGCGTTGGGCAAAAGCAAAGTGACGCTATTAGAAATATTACTGGTAGATTTGGTCCATTGGACAACTCAATTTCAAGTGGTTTAAAGGGTATGTTGGATGGTCCTTTTTATCTGATTAATGAAGAAAGGCATTTTGGTTTAAACGCAGATTGGAACGGTAATAACCCTTTAGTTGGATTTGATATTTCAAGAGTTGTCCCGACAGCTGATGAAAATCGCCCTAAAAGTATTGTAATGAAATTCTGCATTAAAGCTGTAAATACATTTGATGATGTCGTTTTTTGGATTAAAGCATACGGAGTTGTTGAGAACACAGGAGCGTTAAACGCAGGTAATCTTGCACGTGACATTCAACAAGTTAGTGTTAAAACTCAACAACTTGAGGAAAGTTTCAATAAAAATAAAGAACAAACTTCACTGAAGATTCAAGCGATTGAGCGTCAATTAAATGAAAATAATCAAGGTAGTGTTGTTTGGTCTGGGAACGTCACGCAACACTCGACAAACATCATCGAGTTATCCGAGTCTATTTTAAACAAGACGCTTATTTTTTATTTACAGGTATCTCAAAGTCATTCCTTGTCGCAAAATTTTAACGTTCATACTGCATCATTATTTATAGATAAAAGCATTCTTAATGCAACTGGACGCAAATACTGTCACACAGGCTTGTACATTGGGGGTTGGAAAAATTGTCAAATTGAGGTTATAGACGGAAATAGAATCAGAGTTATTGATATATCAGGTATGTATTTGAAAAAAATAACGGTAATTTAG

Genome Context

Tertiary structure

PDB ID

52f03df22a3c6e06dfa0177752063a21227b3bc6178cff812587125e88fe36d3

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,8532

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence