Protein
View in Explore- Genbank accession
- XPP60364.1 [GenBank]
- Protein name
- hypothetical protein
- RBP type
-
TSP
- Protein sequence
-
MSKKIIGDLSVSSNTIVNSKNAIRDINNITADQSGNIPFPLYTKEEIDRITAVLPVSRVGTMDYLPMSINGSYEGATTYYSSKHILPIIIEDNGTLVYLRPGTNGSTDGYYYCYTADARNVSDLVPVLSNTKYVPSFFTVNHKLLDFVGTKASELLFMKTNNGTNDTYTIGLTNGTMNSISHQYVEFNRSLLGTTDPQYAHIVDSTIYIWCIDSYETTSAFDISLYTISVDNVRNGVTTSLARVTGFSGATIYGTAVSASNTVRIAQRYISTSSSDNPFLLTDANTTTSLFQLNTNGVIQAAANSDSTSIRVALFHPWAMNATGITGIQTHWGLSLTYNISTKAYVLDKPAAGPIMVSSNGSSFTYTNPYNSTMENINGFPSDAQGNVPTIFQTADGMVFSTVARYITSPQHKITRATISSFTNAYDSLNLVNRTLNSVTLKYVNPVYGSALGENLINPIVISPTRIMLSCSGNDSNGSFGFDSRVYADIGSTRTYSYNSIVSDSTINGYAPQPTRTRVDNADFKYTGMITLVAEDGTTRSYGSSFVEGLTKPAGGLLNTSTFDFGTAYTMTNTALLTTLKTQMINAVTITGTVLESKIVLYYVPDSSYGKSIAIVSLRTDTVDGSGYSGHVIVSTVDVTLSGQNITALNAAASVINGVSSGVITINLTYFARMAGLTIAKYSGFSYIGIPALFNMGTSSNASFRSMLGKLDASNNIVSLRAITSQYLSGGTSYEVGVLPGFGFGLFENGDVTDYQTKLVYKYHGTTEANLDALIADPTSTPTARYVVASQEVPQGFNVYFTQEIPVFLHGAYYEMQVQTINLTTIQANPANTTFYLYITIVEGAAIYQISTTLLTEELYRVYIGTIVTGASSITSITTEKVTRFLTYRPSTTKRGSAIPASTGVPSSTGSRWH
- Physico‐chemical
properties -
protein length: 914 AA molecular weight: 98596,33530 Da isoelectric point: 5,82062 aromaticity: 0,10284 hydropathy: -0,00842
Domains
Domains [InterPro]
DC_0236
STR
1–914
STR
1–914
1
914
Architecture
STR 1-914
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
914
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 59 | 59 | 0,9801 |
| Central domain | 60 | 330 | 272 | 0,8649 |
| C-terminal | 331 | 914 | 583 | 0,3506 |
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-59
1-59
Central
60-330
60-330
C-terminal
331-914
331-914
Taxonomy
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
XPP60364.1
[NCBI]
Genbank nucleotide accession
PQ464595
[NCBI]
CDS location
range 298895 -> 301639
strand -
strand -
CDS
ATGTCTAAAAAAATAATTGGTGACTTAAGTGTTTCCAGTAATACAATCGTGAATAGTAAAAATGCTATTCGTGACATTAACAATATTACCGCCGATCAAAGTGGGAACATCCCGTTCCCACTTTATACTAAAGAAGAAATTGACCGTATTACAGCAGTATTGCCAGTATCGCGGGTAGGTACAATGGATTATCTACCAATGAGTATTAATGGTTCATATGAAGGTGCTACAACATATTATTCTTCAAAACATATTCTACCTATTATCATTGAAGATAATGGAACATTAGTTTATCTTCGACCAGGTACAAATGGTAGTACTGATGGTTATTATTATTGCTATACGGCAGATGCTCGTAATGTATCAGACTTGGTTCCAGTACTATCTAATACCAAATATGTACCATCATTCTTTACAGTAAATCACAAATTACTTGATTTTGTTGGAACGAAGGCAAGTGAATTGCTATTCATGAAAACTAATAATGGAACTAATGATACATATACAATTGGTCTAACAAATGGTACTATGAATAGTATTTCACATCAATATGTTGAATTTAATAGAAGTCTATTAGGAACAACTGATCCTCAGTATGCTCATATTGTTGATAGTACAATTTATATTTGGTGTATTGATTCATATGAAACTACAAGTGCTTTTGATATTTCATTATATACAATAAGTGTGGATAATGTCCGTAATGGTGTGACAACATCTCTAGCTAGAGTTACTGGATTCAGCGGTGCTACAATTTATGGAACTGCGGTTAGTGCGTCTAATACAGTCCGTATTGCTCAGCGTTATATCAGTACTTCAAGCTCTGATAATCCATTCTTACTAACGGATGCTAATACTACAACAAGTTTATTTCAGTTGAATACCAATGGTGTTATTCAAGCTGCTGCGAACTCAGATAGTACATCAATTCGTGTTGCGTTATTCCATCCGTGGGCTATGAATGCTACAGGAATTACAGGAATACAAACACATTGGGGATTAAGTTTAACTTACAATATAAGTACTAAAGCTTATGTTCTGGATAAACCTGCGGCTGGACCAATAATGGTTTCATCAAATGGTAGTTCATTTACTTATACGAATCCATATAACTCAACTATGGAAAATATTAATGGTTTTCCAAGTGATGCTCAAGGTAATGTTCCAACTATATTCCAGACAGCAGATGGTATGGTATTCAGTACTGTGGCTCGATATATCACATCACCGCAACATAAAATCACTCGTGCAACAATCAGTTCATTTACTAATGCTTATGATTCATTGAATCTTGTAAATCGTACACTAAATTCGGTTACACTGAAATATGTTAATCCAGTTTATGGTTCAGCACTAGGTGAGAATCTTATTAACCCAATAGTTATATCTCCTACCAGAATAATGCTTTCTTGTAGTGGTAATGATTCAAATGGTTCATTCGGTTTTGATTCTAGAGTATATGCTGATATTGGTTCAACCAGAACTTATTCATATAACTCAATCGTTAGTGATTCAACTATTAATGGCTATGCTCCACAACCAACAAGAACAAGAGTTGATAATGCGGATTTCAAATATACTGGAATGATTACACTAGTAGCAGAGGACGGAACTACTCGCTCATATGGTTCTTCATTTGTCGAAGGTCTAACTAAACCTGCTGGTGGATTACTTAATACTAGTACGTTTGATTTTGGCACAGCATACACTATGACAAATACAGCATTGTTAACTACACTGAAAACTCAGATGATCAACGCGGTAACGATAACTGGTACAGTACTAGAAAGTAAAATTGTTCTATATTATGTACCTGATAGCTCATATGGAAAGAGTATTGCTATTGTTTCATTGAGAACTGATACAGTTGATGGTTCTGGATATAGTGGTCATGTAATTGTAAGTACTGTAGATGTTACATTGAGTGGTCAGAATATTACAGCATTAAATGCTGCGGCTTCTGTAATTAATGGTGTAAGCAGTGGTGTGATTACAATTAATCTAACATACTTTGCTCGTATGGCTGGATTGACAATCGCTAAGTATAGTGGATTCTCATATATTGGAATTCCTGCCCTATTCAATATGGGTACTAGTAGTAATGCTTCATTTAGATCTATGTTAGGAAAGCTCGATGCTTCAAACAATATTGTATCTTTAAGAGCAATTACTTCTCAGTACTTGAGTGGTGGCACATCATATGAAGTAGGTGTTCTTCCTGGATTTGGTTTCGGATTATTTGAGAATGGTGATGTTACAGACTATCAAACTAAACTAGTTTATAAGTATCATGGTACTACTGAAGCCAACTTAGATGCGTTGATTGCTGATCCAACATCAACACCAACGGCTCGATATGTAGTTGCTTCACAAGAAGTACCACAAGGTTTCAATGTGTATTTCACTCAAGAAATTCCAGTGTTTCTTCATGGTGCATATTATGAAATGCAAGTTCAGACGATTAACTTAACCACTATTCAGGCTAACCCTGCTAACACAACATTCTATTTGTACATAACAATAGTTGAAGGTGCGGCAATTTATCAAATTAGTACTACACTTCTTACGGAAGAATTGTACAGGGTTTACATTGGTACAATCGTTACTGGAGCATCATCAATAACATCAATTACAACAGAGAAAGTGACAAGGTTCCTTACTTACAGACCGAGTACTACTAAACGTGGTTCTGCGATTCCTGCGAGTACTGGAGTACCTTCAAGTACAGGTTCACGTTGGCATTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
011717c61ac8cc1ce8409183391e13ab160d927ef308e50494df826c9a0bb750
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50