Protein

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Genbank accession
XCO39702.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MAFSWQESVKPAGTQDIQCDIEYLDKSYIHVYLDGTETTAFTWTSDTNIRLDSALSADSKVLLVRKTEREYLYIQFASGAPFIEGNVDTQNTQFLHLAQELVEGRAIEGFYGDISMNGYRITNIGAPVDVSDAATKGYVDSGDTALDTRISAEVSALDTKISAEVAARIRGDIKALDDAKDYTDSSLAGVILPQGMTDVGYWLPSAVSLMGASTELTPIGVRGFYRAQDGGAGVWVKTGNVDLSLAGKHFPASAVLYTAEGVEYRLKVESGDTVDARANGLRAIDEGTSVDDQTEDFTCVAEAVNGITGLVKTMVNDEDLKTYLKVVIPAVGTLRQGKSAIKAYSRLTLDFQQCSVYTRPSPLNRQEVTGVYMNAIERGIEDIQYISNLFSGATSYSNMTLSDFHIIGGRFYGDHKTTLGVAECSTGTGILTYNMENSTLNGCWFQGYAVGRQYVRTVPGYYYNNLGQKVLGTLVPEVATSGIGSYEGVHESDVTSYGLRYLHLRTVSNWGRFDKCKFGTYANWASSPDGSQFDYFIENWGAGVVFTSGVIEANNMNAGPLKGYVLDSARGVCVLGLYYENATAPGWVISKPANSFYYRGNGLHLDNLGSYYLTNSRGQPLVAFEEGFFGSYNANGEYERGGWETYYNYFAGPNTWAVGSPTPDLGAFPHGVYDFKFGTYGIHYSGNVPDVDSVRDTLWGNEFLSPYGLQVNSGTLLLPMANPAHQSNIVVWFKDLTGNFDVHNLSVGWNDNNNAEDGSSVNLYQTYGVRLFDYRNGYKAALIPYVNPRATDSRMYTSAGNKLRIVVDSSAPIILKAVQAFVGGVPIFPSKAPEYVPRTQADRVWGTMNSGDTSSGAYYGSRIGGGIFKPGDVVTAFSPFANAELRAPAKYQDISGTYGINTETRIITGGAAWGAGLSGATFNLTITAVDSGNNWTTVQVPTGNLPHVICGLPLNVTANSSGGSTGFINIIKRVSNGDGTLSNQYVLEGLLGPVGGTLTVSTSSAYTVATGISRKLTGTTNSFSVSSWLSVVGGDSRVGYGATSAGTRQTRYYYNGTDVSAGMGSSGANTAYILGTGGITLNGSILSSISYSFGTSSAYPANIYSQNAVTVVSDATRKEGIRELNSAEIKLSSLLAKLFRAYKLKSAIAEKGDAARLHVGTIAQLVIDAFTEAGLDWHQYGVVTYESWDASEEVLDDDGVVVTPAREAGEIYMVRYDELNALILAGQEARIAALESALSKEE
Physico‐chemical
properties
protein length:1242 AA
molecular weight: 133539,94300 Da
isoelectric point:4,93558
aromaticity:0,10870
hydropathy:-0,14952

Domains

Domains [InterPro]
DC_1609
STR
1–460
DC_1609 IPR036388
IPR005604
ATT
13–103
IPR005604 cd10144
IPR030392
CHP
1113–1238
IPR030392
IPR030392
CHP
1113–1175
IPR030392
XCO39702.1
1 1242
Architecture
STR
ATT
STR
RBD
STR 1-12 | ATT 13-103 | STR 104-460 | RBD 1113-1240 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO39702.1
1 1242
Domain Start End Length (AA) Confidence
N-terminal 1 291 291 0,9920
Central domain 292 1005 715 0,9755
C-terminal 1006 1242 236 0,9022
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-291
Central
292-1005
C-terminal
1006-1242

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146033
[NCBI] 		3232213 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO39702.1 [NCBI]
Genbank nucleotide accession
PP889483.1 [NCBI]
CDS location
range 40462 -> 44190
strand +
CDS
ATGGCATTCAGCTGGCAAGAGTCGGTAAAGCCTGCAGGTACGCAGGATATCCAGTGTGATATCGAGTACCTTGATAAGTCCTACATTCATGTCTACTTAGATGGTACCGAGACTACCGCCTTCACGTGGACCAGTGATACCAACATCCGACTAGACTCCGCCCTTAGTGCAGACTCTAAAGTGTTGCTCGTTCGTAAGACGGAGCGGGAGTATCTTTACATCCAGTTTGCTAGTGGTGCGCCGTTTATCGAGGGCAACGTAGATACACAGAACACCCAGTTCCTGCACTTGGCTCAGGAATTGGTGGAAGGTCGCGCTATTGAGGGCTTCTACGGCGATATCAGTATGAACGGGTATCGCATCACTAACATAGGCGCCCCAGTGGATGTCAGCGATGCAGCTACTAAAGGTTACGTAGATTCAGGGGATACGGCCCTAGATACTAGGATATCTGCAGAGGTATCTGCTTTAGATACAAAAATATCTGCAGAGGTAGCTGCCAGGATTCGCGGCGACATCAAAGCCTTAGATGACGCTAAAGACTATACCGATTCGTCTCTAGCGGGGGTAATCCTCCCGCAAGGTATGACCGATGTAGGTTACTGGCTGCCGTCGGCTGTATCCCTTATGGGGGCCTCTACAGAGTTAACCCCCATTGGTGTACGTGGCTTCTACCGCGCACAAGATGGCGGCGCAGGGGTGTGGGTAAAAACGGGTAATGTAGACCTAAGCCTGGCCGGGAAGCATTTCCCCGCCAGTGCAGTCCTGTATACCGCAGAAGGTGTAGAGTACCGCCTCAAAGTAGAATCTGGTGACACAGTAGATGCACGCGCCAACGGGCTGCGCGCCATCGACGAGGGCACCAGCGTGGATGACCAGACGGAGGATTTTACCTGTGTAGCCGAGGCGGTTAACGGTATAACCGGACTGGTTAAGACTATGGTTAACGATGAGGATTTGAAAACCTACCTGAAAGTCGTCATTCCGGCAGTGGGTACTCTCCGACAGGGCAAGTCAGCAATCAAAGCCTACTCAAGACTGACACTTGATTTTCAACAGTGTTCGGTGTATACCCGCCCCAGTCCATTAAACCGCCAGGAAGTGACTGGCGTGTACATGAACGCTATTGAGCGTGGTATTGAGGATATTCAGTATATATCCAACCTATTCTCGGGAGCCACGTCATACAGTAATATGACCCTATCTGACTTCCACATAATCGGTGGGAGATTCTATGGGGACCACAAGACTACCTTAGGTGTGGCTGAGTGTAGTACTGGTACCGGTATCCTGACTTACAACATGGAAAACTCCACCCTGAATGGGTGTTGGTTCCAGGGTTATGCTGTCGGTCGTCAGTACGTGCGCACTGTGCCCGGATACTACTACAACAACCTCGGACAGAAAGTACTAGGTACGTTAGTGCCAGAAGTAGCTACTTCTGGTATCGGTTCGTACGAGGGGGTGCACGAGTCTGATGTTACATCCTACGGGCTGCGCTACCTGCATCTCCGGACGGTATCTAACTGGGGTAGGTTTGATAAGTGCAAGTTCGGGACTTACGCCAACTGGGCCAGCAGTCCTGATGGGAGTCAATTTGATTACTTCATCGAGAACTGGGGTGCTGGCGTAGTCTTTACTAGCGGGGTTATTGAAGCTAACAACATGAATGCAGGTCCGTTGAAGGGCTACGTCCTGGATTCGGCGCGCGGCGTTTGTGTGCTTGGTCTATACTACGAGAATGCAACCGCCCCTGGGTGGGTTATCTCCAAACCGGCCAATAGCTTCTACTATCGTGGCAACGGTCTGCACCTAGATAATCTGGGTAGTTACTACCTGACCAACTCGCGCGGACAGCCGCTGGTGGCGTTTGAGGAAGGCTTCTTTGGCTCCTACAACGCCAACGGGGAGTACGAACGAGGTGGCTGGGAGACGTACTATAACTACTTCGCAGGCCCCAACACGTGGGCTGTGGGTAGCCCTACCCCTGATTTAGGTGCCTTCCCGCATGGTGTGTACGACTTTAAGTTTGGCACTTACGGCATTCACTATAGTGGCAATGTTCCGGACGTAGACTCTGTTAGGGACACTTTGTGGGGTAACGAGTTTCTGTCTCCTTATGGGTTGCAGGTCAACTCAGGGACCTTGCTCCTCCCTATGGCAAACCCAGCACACCAAAGCAACATAGTTGTGTGGTTTAAAGACCTGACAGGTAACTTTGACGTACACAACCTGTCGGTAGGCTGGAACGATAATAATAATGCCGAGGACGGCAGTTCGGTTAACTTGTACCAGACTTACGGCGTGCGTCTGTTTGACTACCGTAACGGGTATAAGGCCGCCTTAATCCCTTATGTTAACCCGAGAGCAACCGATTCCAGAATGTACACTAGTGCAGGGAACAAGTTGCGGATTGTGGTAGATAGTTCTGCTCCCATCATACTCAAGGCTGTGCAGGCGTTTGTTGGCGGTGTGCCTATCTTCCCTTCAAAGGCTCCGGAGTACGTCCCTAGAACACAGGCCGACCGGGTGTGGGGTACCATGAACTCTGGGGACACTTCCTCTGGTGCGTACTACGGCTCCAGGATTGGTGGCGGCATATTCAAGCCTGGTGACGTTGTAACCGCGTTCTCCCCGTTCGCTAACGCGGAATTGCGGGCACCTGCCAAGTATCAGGATATATCCGGTACGTACGGGATAAACACTGAGACTCGTATCATTACCGGTGGAGCTGCTTGGGGGGCCGGATTGTCCGGGGCTACGTTTAACCTTACCATTACCGCAGTGGACAGCGGAAACAACTGGACTACCGTGCAGGTGCCTACTGGCAATCTACCGCACGTAATCTGTGGGCTACCCTTAAATGTTACCGCAAACTCCTCGGGTGGAAGTACCGGCTTCATTAACATCATTAAGCGTGTATCTAATGGTGATGGAACCCTCTCGAACCAGTATGTTCTGGAGGGCTTGCTCGGCCCGGTTGGTGGGACCTTAACGGTGTCCACTAGCTCTGCGTATACTGTAGCTACTGGGATATCCCGAAAACTCACCGGGACTACCAACTCCTTTAGTGTATCATCTTGGCTAAGTGTGGTTGGTGGGGATTCCCGTGTAGGTTACGGAGCTACGTCTGCAGGGACCCGGCAAACCCGCTACTACTACAACGGCACTGATGTATCTGCCGGGATGGGTAGCTCTGGCGCCAACACTGCGTACATACTCGGTACTGGGGGTATCACCTTAAACGGCAGCATACTCTCATCCATTTCGTACAGCTTTGGCACATCCTCAGCTTATCCGGCAAACATATACTCACAGAACGCTGTTACGGTGGTGTCCGACGCCACTCGCAAAGAGGGTATCCGAGAATTAAACTCTGCGGAGATTAAGCTGTCCTCTCTTTTAGCGAAGCTGTTTAGGGCATACAAGCTTAAGTCAGCGATAGCCGAGAAGGGGGATGCAGCTAGGTTGCACGTAGGTACTATTGCGCAGCTGGTTATCGATGCGTTCACGGAGGCTGGGCTGGACTGGCACCAGTACGGAGTAGTTACTTATGAGAGCTGGGATGCCTCTGAGGAAGTACTGGACGACGATGGTGTAGTGGTGACCCCCGCTAGAGAGGCAGGGGAAATCTACATGGTTAGGTACGATGAGCTAAACGCCCTGATTTTAGCAGGGCAAGAGGCGCGTATCGCTGCTTTGGAAAGTGCATTAAGTAAGGAGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
02b7e501037634bbc768aeb80e4075729bda6bcad50a67d5022c152500fb0bae
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5685
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank