Protein

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Genbank accession
XOD48581.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 0,99
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MAIKLSNNAVSHLAAELAQGDAQIILTPGEGSMFPTLGAGDYFQATLAKASGQYEIVRATARDIDTLTVLRGQENTQALHFAAGDRIELRVTAGVLNALADAVRQIRPKPGDIKMWSGAVANIAAVHGSGWQLADGTNGTIDLRDRFIVGAGASYAPGNTGGANTVAISAAQMPAHNHGVSDPGHIHGVSDPTHAHSVYDPGHSHNTNSNYYNIGAGGSGTATPYNGGGQFVSGGAIIAAATGIAIYGAATGISIQSHATGISTQNAGGGAEHENRPPYFALAFIQYTGAGVIEI
Physico‐chemical
properties
protein length:295 AA
molecular weight: 30018,85510 Da
isoelectric point:5,95607
aromaticity:0,06441
hydropathy:-0,05254

Domains

Domains [InterPro]
DC_0891
STR
1–294
DC_0891
cd22641
STR
89–183
cd22641
SSF88874
STR
109–285
SSF88874
XOD48581.1
1 295
Architecture
STR
STR 1-294 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XOD48581.1
1 295
Domain Start End Length (AA) Confidence
N-terminal 1 186 186 0,7394
Central domain 187 284 99 0,0052
C-terminal 285 295 10 0,9974
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-186
Central
187-284
C-terminal
285-295

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage YL3
[NCBI] 		3390403 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ralstonia pseudosolanacearum
[NCBI] 		1310165 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOD48581.1 [NCBI]
Genbank nucleotide accession
PQ295878.1 [NCBI]
CDS location
range 56310 -> 57197
strand +
CDS
ATGGCTATCAAGCTGTCCAACAATGCAGTGTCCCATCTTGCCGCCGAGCTGGCGCAGGGCGACGCCCAAATCATCCTGACGCCGGGCGAGGGCAGCATGTTCCCGACACTCGGCGCCGGAGACTACTTCCAGGCCACGCTCGCGAAAGCATCCGGCCAATACGAGATCGTGCGCGCCACTGCGCGCGACATCGACACGCTGACCGTGCTGCGAGGGCAGGAGAACACCCAGGCGCTGCACTTCGCAGCCGGCGATCGTATCGAGCTGCGCGTCACGGCGGGGGTGTTGAATGCGCTCGCCGACGCGGTGCGCCAGATTCGTCCCAAGCCGGGAGACATCAAGATGTGGAGCGGCGCGGTCGCCAACATCGCTGCCGTGCATGGGTCTGGATGGCAGCTTGCCGATGGGACGAATGGGACCATTGACCTACGGGACCGGTTCATCGTCGGGGCGGGTGCATCCTATGCGCCTGGGAACACCGGCGGAGCCAACACCGTCGCTATTTCCGCTGCACAGATGCCCGCGCACAATCACGGCGTCAGCGATCCGGGCCACATCCACGGGGTGAGCGACCCGACCCATGCGCACAGCGTCTACGATCCGGGCCACTCGCACAACACGAACTCGAACTACTACAACATCGGGGCTGGAGGTAGCGGCACTGCTACGCCGTACAACGGCGGCGGCCAATTTGTATCCGGCGGCGCGATCATCGCGGCGGCCACCGGCATCGCCATCTATGGCGCGGCCACCGGCATTTCGATTCAGAGCCATGCAACTGGCATCAGCACGCAGAACGCCGGCGGGGGTGCTGAGCATGAGAACCGGCCGCCGTATTTCGCGCTGGCGTTCATCCAGTACACTGGCGCTGGTGTGATTGAAATCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
f700924e9e603daa6cf70b981cd2ede354021da4a1575f6381e85f315277d05f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8192
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Development of a Virulent Phage Cocktail Formula and Evaluation for Control of Tobacco Bacterial Wilt Disease He,H. 2025-03-13 — GenBank