Protein

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Genbank accession
QXV74420.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,81
Protein sequence
MAVKPARAQVRQTAQPNPQAPRAQSKTFPAPSRGWIANENLAMAQPGGALILENWFPTTTGIRTRGGSLKYATISSGPVLRVWTFKSGLVEEFFASDETNIFNITTVADADVIPTPVVTGQTSGYYSTAQASNAGVTVLSVVNGTDTPKYYDGSTWANHAFTGLATPSQLSFVWLYASRLFYVRKNTMSAWYLPVDSINGALAEFSLAGIFQKGGSLLFGGKWSLDSGDGLDDKCVFVSTEGEVAVYQGTNPGSASDWQKVGVYSITPPMGANATMSAGGDLMIATEDGIVPISEAVRKDAAALSISAVTSTIETEWKKEVVNRRGQPWEIMKWPTNNMMVVSLPSLTDDQQALCYVSNLKTGAWGYFTGWDVRCIGLFAGNGYFGSNAGTVHRMDITGSDDGSPYTCVYVGLPDHIDSPGVTKTINQARSIFKSNVPFVAQVSASVNYTVELPSPPSSAADFSEDVWDVGLWDDAIWDAGQATSITTKWVSIGKTGFSISPQVQITCGITPTTRTELVAFDVLYENGSVMT
Physico‐chemical
properties
protein length:532 AA
molecular weight: 56982,30640 Da
isoelectric point:4,84560
aromaticity:0,10338
hydropathy:-0,06692

Domains

Domains [InterPro]
DC_0395
STR
5–532
DC_0395
QXV74420.1
1 532
Architecture
STR
STR 5-532
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXV74420.1
1 532
Domain Start End Length (AA) Confidence
N-terminal 1 399 399 0,7941
Central domain 400 521 123 0,0460
C-terminal 522 532 10 0,9812
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-399
Central
400-521
C-terminal
522-532

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHEph18
[NCBI] 		2836133 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV74420.1 [NCBI]
Genbank nucleotide accession
MW980068 [NCBI]
CDS location
range 6565 -> 8163
strand +
CDS
ATGGCAGTGAAGCCGGCAAGGGCGCAGGTCCGCCAGACGGCACAGCCCAACCCACAGGCCCCACGAGCTCAAAGCAAGACGTTCCCGGCGCCGTCGCGTGGCTGGATTGCGAACGAAAACCTTGCGATGGCCCAGCCTGGCGGCGCGCTGATCCTCGAGAATTGGTTCCCGACCACGACAGGCATCCGCACCCGCGGCGGCTCGTTGAAATACGCCACGATCTCCTCGGGCCCTGTTCTTCGCGTTTGGACGTTCAAAAGCGGCCTCGTCGAGGAATTCTTTGCCTCGGACGAGACGAATATCTTCAATATCACCACGGTAGCCGACGCAGACGTGATCCCGACGCCGGTCGTGACCGGGCAGACCAGCGGCTATTATTCGACGGCCCAGGCGAGCAATGCAGGCGTCACGGTTCTTTCCGTGGTCAACGGTACGGACACGCCAAAATATTATGATGGCTCGACATGGGCCAACCACGCATTTACGGGCTTGGCCACGCCATCACAGCTCTCATTCGTCTGGCTCTATGCCAGCAGGCTGTTCTATGTCCGCAAGAACACGATGTCGGCTTGGTATCTGCCGGTCGACAGCATCAACGGCGCCTTGGCGGAATTCAGCCTTGCAGGCATCTTCCAGAAGGGCGGCTCACTGCTTTTCGGCGGCAAGTGGTCGCTCGATTCCGGCGATGGCCTTGACGATAAATGCGTCTTCGTCTCGACGGAAGGCGAGGTCGCTGTCTACCAGGGCACGAACCCCGGGAGCGCTTCCGATTGGCAGAAGGTAGGCGTTTACAGCATCACCCCGCCTATGGGCGCCAATGCCACCATGTCGGCCGGCGGTGATCTAATGATTGCGACTGAAGATGGAATCGTCCCGATCTCTGAAGCGGTTCGCAAGGATGCCGCCGCTCTCTCCATCTCGGCTGTGACAAGCACGATCGAGACGGAATGGAAGAAAGAGGTCGTCAACCGGCGCGGTCAGCCGTGGGAAATCATGAAGTGGCCGACCAACAACATGATGGTTGTGTCGCTCCCGTCACTGACCGACGACCAGCAGGCCCTATGCTACGTCTCAAACCTCAAAACAGGGGCGTGGGGCTATTTCACCGGCTGGGATGTGCGCTGTATCGGCCTATTCGCCGGCAATGGCTATTTCGGCTCGAATGCCGGGACGGTCCATCGCATGGACATCACCGGCAGCGATGATGGTTCGCCCTATACCTGCGTCTATGTCGGCCTGCCGGATCATATCGATTCTCCTGGCGTGACGAAGACGATCAACCAAGCGCGATCGATCTTCAAATCCAACGTTCCCTTCGTCGCGCAAGTCAGCGCCTCCGTCAATTACACCGTCGAGCTCCCGTCGCCGCCGTCTTCGGCCGCGGATTTCTCGGAAGACGTTTGGGATGTCGGGTTGTGGGACGACGCCATCTGGGATGCCGGCCAAGCGACTTCGATCACCACGAAATGGGTGTCCATCGGCAAGACCGGGTTCTCGATCTCGCCGCAGGTTCAGATCACTTGCGGCATCACGCCGACGACGCGCACGGAACTGGTTGCCTTCGACGTGCTATATGAAAACGGCTCGGTGATGACGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
219901463fd8131db6e925a41644e43350079e75c00cbd3db1a811bccb636d23
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8972
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Hidden Diversity of Double-Stranded DNA Phages in the Symbiotic Bacterium Rhizobium Santamaria,R.I., Bustos,P., Cauwenberghe,J. and Gonzalez,V. 2011 — GenBank