Protein

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Genbank accession
YP_010089574.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 0,99
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MTNKAVTPKTLNDRTATNDRTGIARFATPGAQGEFEAGTSSTVMVNPKLLFDKFANTDRIQVNTSSGLTITGNLWDHYTINIQEASTSQRGTTTLATAAEVRTGTDAKKIVTAATLHAKTATEGAIGLAQYATQAQVDAGTLSDRIVPPAYLKQTIQVTESWQATDSVRGTVRLSTGDGTWKGNDTNGSTLPDNGYASKGVAVSPYELNLTLKHYLPRLGKAYDTGMLGGQTPDKYARRDIAQTISGAWSFSQDTSFSNNISVQNIIYANGGEVKISPTADTGNVHVRFQNRDGSERGIIYAEPQTASAGNLKVRVKNGTGTTAASQTYTFGGNGTLEVPNEVSTKTLRSSGNAIVGGTVMVKDVQMLAVEGLNSIFGAQSQSAFIRSRDADTQIFAQDSTGSYPILTTKNYARLADGRYVKKAGDTMTGNLNLSGSAIVITGSESWYVPTNETVMRQGSWTAEIKDATKLKGLRGYMVPIRTPIDPANPSTLVVTGYEEKTAAGGVLTQVGVTTNNTYQLWTPYPPTTETADKRFAHTVWMRIYNPNLNKFDDWMRVFTSATPPTAADIGAPSSVSTQVKTLEVLEWIKLGPVKIWPDRPNQTLKFEWVGD
Physico‐chemical
properties
protein length:612 AA
molecular weight: 65857,79030 Da
isoelectric point:8,92934
aromaticity:0,07680
hydropathy:-0,39085

Domains

Domains [InterPro]
DC_1209
STR
1–601
DC_1209
IPR048391
ATT
458–559
IPR048391
YP_010089574.1
1 612
Architecture
STR
ATT
STR
STR 1-457 | ATT 458-559 | STR 560-601 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010089574.1
1 612
Domain Start End Length (AA) Confidence
N-terminal 1 522 522 0,4461
Central domain 523 601 80 0,2536
C-terminal 602 612 10 0,9789
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-522
Central
523-601
C-terminal
602-612

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage KPV15
[NCBI] 		1913572 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Jiaodavirus
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010089574.1 [NCBI]
Genbank nucleotide accession
NC_055715 [NCBI]
CDS location
range 158610 -> 160448
strand +
CDS
GTGACTAATAAAGCAGTTACACCTAAAACATTAAATGACCGTACAGCAACTAACGATCGTACTGGTATTGCTCGCTTCGCGACACCTGGTGCCCAGGGTGAATTTGAAGCTGGTACTTCAAGTACAGTAATGGTAAACCCTAAATTACTGTTCGATAAATTTGCTAATACTGATCGTATCCAAGTTAATACTAGTTCTGGCTTAACTATTACTGGGAACCTCTGGGACCATTATACCATCAACATACAGGAAGCAAGTACTTCTCAAAGAGGTACAACCACTCTTGCTACTGCTGCTGAGGTTAGAACCGGCACCGATGCCAAGAAAATAGTTACTGCTGCCACGCTACATGCTAAAACAGCAACTGAAGGAGCTATCGGTCTTGCTCAGTATGCTACACAGGCACAAGTTGATGCAGGCACATTAAGTGATAGAATTGTTCCTCCTGCTTACTTGAAACAAACTATTCAGGTAACAGAGTCATGGCAAGCTACAGACAGCGTTAGAGGGACCGTGAGGCTATCTACAGGCGATGGAACGTGGAAAGGTAATGATACCAATGGCTCAACTCTTCCGGATAACGGGTATGCCTCTAAGGGCGTCGCAGTGTCTCCGTATGAATTGAACCTCACGTTGAAACATTACTTACCTCGTCTTGGTAAAGCCTATGACACAGGAATGCTAGGTGGTCAAACCCCAGACAAATATGCTCGTCGCGATATAGCGCAGACTATTTCTGGAGCTTGGTCATTTAGTCAGGACACTTCATTTAGCAATAATATTTCTGTCCAGAATATTATATATGCTAATGGTGGTGAAGTTAAAATTTCTCCAACTGCTGACACTGGAAATGTGCATGTTCGTTTTCAAAATAGAGACGGAAGCGAGCGTGGTATAATTTATGCTGAGCCTCAAACAGCTTCAGCCGGAAACTTAAAAGTTCGCGTAAAAAACGGAACAGGAACTACTGCTGCAAGCCAGACCTACACATTTGGCGGTAACGGTACGTTAGAAGTTCCTAACGAAGTGTCAACTAAAACTCTGAGGTCTTCTGGAAATGCAATAGTTGGCGGAACTGTTATGGTTAAGGACGTTCAGATGCTTGCTGTCGAGGGATTGAATTCAATATTCGGTGCCCAATCACAGTCCGCATTTATTCGTTCCCGTGACGCTGATACACAAATTTTTGCACAGGATTCAACTGGATCGTATCCAATTTTAACTACCAAAAACTATGCAAGATTAGCTGATGGTCGTTATGTTAAGAAAGCTGGTGATACCATGACCGGCAATCTTAACTTAAGCGGTTCTGCTATCGTCATTACAGGTTCTGAATCATGGTATGTTCCAACAAATGAAACTGTAATGAGACAAGGTTCTTGGACTGCTGAAATTAAAGACGCTACTAAACTAAAAGGTCTTCGCGGTTATATGGTTCCAATCAGAACACCGATTGACCCTGCTAACCCAAGCACTTTAGTAGTGACCGGATATGAAGAAAAGACTGCTGCTGGCGGTGTTTTAACTCAGGTTGGTGTAACTACAAACAATACTTATCAACTTTGGACTCCTTATCCTCCAACAACCGAAACTGCCGATAAGCGTTTCGCGCATACTGTGTGGATGAGGATTTATAATCCAAACCTTAATAAGTTTGATGATTGGATGCGAGTATTTACATCTGCTACTCCTCCAACTGCAGCTGATATCGGAGCTCCAAGCTCAGTATCAACTCAGGTTAAAACCCTTGAAGTTTTGGAATGGATTAAGCTTGGTCCAGTTAAAATCTGGCCAGACCGTCCAAATCAAACTCTCAAATTTGAATGGGTAGGTGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f2aa9ff5348de0a32f042dc35c65ac1b85c02aae71f3506fa805ef8141c45726
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6411
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Antibacterial composition for prophylaxis and treatment of hospital infections (variants), strains of bacteriophages, used for obtaining thereof Aleshkin,A.V., Volozhantsev,N.V., Verevkin,V.V., Krasilnikova,V.M., Myakinina,V.P., Popova,A.V. and Svetoch,E.A. 2016-10 — GenBank