Protein

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Genbank accession
AGH07545.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,85
Protein sequence
MARQGIFTGFTPNDGLGDSLALGATKVNQNFTEIYTTFGDGTNLSANAGSAGTWTKAGNSGIYTSKNVGIGTTDPTAALFVSGNVQLTGITTGTFVGDGSGLTGVTATGSGVVIKDSGVLVGVAQSLNFDRNLDVTQAFGGNVTIGAADTVGFAYTSGFSTTSAYANVAGVSTTSGTAGFADTATLAYTANFATVAGIVTYAQASGIATNSGVAEYAKVAGVATYTGNTGFATMAGYAHTAGIASVAQNLTGTPSIVVDNVNGLGIVTFPGQGSKMRFDFDATGDLPSATSWRGMFAWANNTKTAYVSSGTTMGGYNGWRKILHGDHLGNYFTVGVITASKFAGDGSELTNLPSTDSIWRTNSTGIHTLSNVGLGTTNTQSYKLRVVGNLGIAGRVDGTATDNRLPFLWASYSSLPLPGDYHGQFAHAHDTGKAYFAHAGAWIELISRNLDNTVGTGTEHYKVGVITATSFTGDGSGLSNIAVSYAASSGIATLSRGLTGKPDILVANINCTGIVTGATFVGDGSGLTGITASGSGIIIREGGTLVGTIGTVNFGTGFSVSPASAGVVTVTTSGGGGGGISGMVYQEEGSTVGTAQTVNFIGAACTVTHSGGVATVNLAGAVPFTGAAATITGLDISQYEQAYSWGNHASAGYITNINGSNLGDLSNVSSATPSTNHVLTWSGSQWVPAAAQGGGGSGGGVIIKEEGTNVATGVTSINFVGSGVTATASGTDATITISAIGGGGGVSTTGFGTYTASAGVEQQIDSFPVASYSGAEYTFMIGLGTFRQSQKVLVMHDGSTAFSQEYGIMFSPEQQVSIAATISSGNVLVKFTPEAGISGLSTYRYVKTLIQGL
Physico‐chemical
properties
protein length:853 AA
molecular weight: 85414,24950 Da
isoelectric point:5,24427
aromaticity:0,08675
hydropathy:0,15147

Domains

Domains [InterPro]
DC_0533
ATT
1–57
DC_0533 DC_1345 DC_1556
IPR036240
STR
2–69
IPR036240 DC_1345
AGH07545.1
1 853
Architecture
ATT
STR
STR
RBD
ATT 1-57 | STR 58-69 | STR 85-510 | RBD 544-853
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGH07545.1
1 853
Domain Start End Length (AA) Confidence
N-terminal 1 83 83 0,7768
Central domain 84 286 204 0,2307
C-terminal 287 853 566 0,4969
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-83
Central
84-286
C-terminal
287-853

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-SSM6a
[NCBI] 		682650 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH07545.1 [NCBI]
Genbank nucleotide accession
HQ317391.1 [NCBI]
CDS location
range 74486 -> 77047
strand -
CDS
ATGGCTCGACAGGGAATATTTACTGGATTCACACCGAATGATGGTCTGGGAGATTCCCTCGCCTTGGGTGCAACCAAAGTAAACCAAAACTTTACAGAGATCTATACTACCTTTGGTGACGGAACAAACCTTAGTGCCAATGCAGGGAGTGCTGGTACTTGGACGAAGGCAGGGAACTCAGGAATCTACACAAGTAAGAACGTTGGCATCGGAACAACCGATCCTACTGCTGCTTTATTTGTATCAGGTAACGTTCAATTAACAGGTATTACAACTGGAACATTCGTTGGAGATGGTTCTGGTCTGACTGGTGTGACTGCAACAGGTTCTGGTGTTGTCATTAAGGACAGTGGTGTTCTAGTTGGTGTTGCACAGAGTCTTAACTTCGATAGAAACTTAGATGTTACACAGGCATTTGGTGGTAACGTTACAATCGGTGCTGCTGATACAGTAGGATTTGCATATACTTCTGGATTCTCTACCACATCTGCATATGCAAACGTTGCTGGAGTATCTACCACATCAGGAACAGCTGGGTTCGCTGACACGGCAACTCTGGCTTACACTGCAAACTTTGCCACAGTCGCTGGTATTGTAACCTACGCACAGGCATCTGGTATTGCAACTAACTCAGGAGTAGCCGAGTACGCAAAGGTAGCTGGTGTTGCAACATACACTGGTAACACTGGGTTTGCAACCATGGCTGGGTATGCACACACAGCTGGTATCGCCTCAGTCGCACAGAATTTAACAGGAACTCCATCAATAGTTGTTGATAATGTCAATGGTCTTGGAATTGTAACCTTCCCAGGCCAAGGTAGTAAGATGCGTTTTGACTTTGACGCAACAGGTGACTTACCTAGTGCTACAAGTTGGAGAGGTATGTTTGCATGGGCAAACAATACTAAGACTGCATATGTTTCCAGTGGAACCACAATGGGTGGTTACAATGGTTGGAGAAAGATACTTCATGGTGATCATCTAGGTAACTACTTCACCGTGGGTGTTATAACTGCATCCAAGTTTGCTGGTGATGGATCTGAACTTACAAACTTACCATCAACAGATAGTATTTGGAGAACAAACTCCACTGGTATTCACACTCTCAGCAATGTTGGTCTTGGAACTACCAATACACAGAGTTATAAACTTAGAGTTGTAGGTAATCTTGGAATTGCTGGTCGTGTAGACGGTACTGCAACAGATAATAGACTACCATTCCTATGGGCTTCTTATTCATCTCTACCTTTGCCAGGAGATTATCACGGTCAGTTTGCACATGCACATGATACTGGTAAAGCATACTTTGCACACGCTGGTGCATGGATAGAACTCATCAGTAGAAACCTTGATAATACTGTAGGAACAGGAACTGAACACTATAAAGTTGGTGTTATAACTGCGACATCATTCACTGGTGATGGATCTGGATTATCTAATATCGCAGTATCCTACGCAGCTTCTTCTGGTATCGCAACTCTATCAAGAGGATTGACTGGTAAACCTGATATCTTAGTTGCTAATATCAACTGTACTGGTATTGTTACTGGTGCAACATTCGTTGGAGATGGTTCTGGACTGACAGGTATCACTGCATCTGGTAGTGGTATTATCATTAGAGAAGGTGGCACACTCGTAGGAACTATTGGAACTGTAAACTTCGGAACTGGTTTCAGTGTTTCCCCTGCATCTGCTGGTGTTGTAACAGTCACCACATCAGGTGGTGGAGGTGGTGGCATCTCTGGTATGGTATACCAAGAGGAAGGATCTACCGTTGGTACTGCACAGACAGTTAACTTTATTGGTGCTGCATGTACAGTAACGCATAGTGGTGGAGTTGCAACTGTTAACTTGGCAGGAGCGGTTCCATTCACAGGTGCTGCTGCAACTATCACTGGTCTAGATATATCCCAGTATGAACAAGCATACTCATGGGGCAACCATGCAAGTGCTGGATACATCACAAATATTAATGGTTCAAACTTAGGTGATCTATCTAATGTTTCGAGTGCAACTCCAAGCACCAACCATGTACTAACATGGAGTGGATCACAATGGGTTCCAGCTGCTGCTCAAGGTGGTGGTGGTAGTGGTGGTGGTGTCATCATCAAAGAAGAGGGAACTAACGTTGCAACAGGTGTAACCTCAATCAACTTTGTTGGAAGTGGAGTCACTGCAACGGCATCTGGAACTGATGCAACTATCACGATCAGTGCAATAGGTGGTGGCGGTGGTGTCTCAACCACTGGATTCGGAACATACACTGCATCCGCTGGTGTAGAACAACAGATTGATTCATTCCCAGTTGCCAGTTACTCTGGTGCTGAGTACACATTCATGATTGGTCTGGGAACATTCAGACAATCACAGAAAGTTCTTGTCATGCACGACGGAAGCACAGCGTTCTCACAAGAATATGGCATCATGTTCTCTCCAGAACAACAGGTATCCATTGCTGCAACAATAAGTAGTGGTAACGTTTTAGTTAAATTCACACCAGAGGCAGGGATCTCTGGATTGTCCACATATAGATACGTTAAGACTCTGATTCAAGGATTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f006d8ec4ee7c14b2a008e7fe5ca783743a6e39f451181835a730d865b840cdd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5929
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage S-SSM6a Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank