Protein

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Genbank accession
QOI69710.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MRKLYLGNGDKKFKFADTTTEIHLNAFDDGSAATLTADAKVRIKNDSGYLLGISASITNNHAVITSGQLAQLPVGSYLLELWNTVDGGTAIYPSDGFLALQINENVTGISGGLVSSITVDDFIQQFSDLSQQLKQEVSVAVANGLKGDKGADGPSAYQVAVINGYKGSQTDWLASLVGAKGDKGDKGDAGKDFQIVKTFPSIAQMNGDGFSDGDFTMIASDVNDPDDGKLYVWNGTSFTYIADLSGSQGIKGDKGDKGDKGDKGDKGDQGLSAYQVAVNAGFSGSVNQWFASLVGAKGDKGDKGADAVINIISQAAYDALADKSGVYFIEG
Physico‐chemical
properties
protein length:331 AA
molecular weight: 34509,70260 Da
isoelectric point:4,50406
aromaticity:0,08761
hydropathy:-0,23958

Domains

Domains [InterPro]
DC_1725
STR
2–237
DC_1725
IPR050149
Unmapped
145–304
IPR050149
DC_2121
ATT
218–329
DC_2121
QOI69710.1
1 331
Architecture
STR
ATT
STR 2-217 | ATT 218-329 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage MLC-A
[NCBI] 		2776765 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactobacillus sp.
[NCBI] 		1591 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QOI69710.1 [NCBI]
Genbank nucleotide accession
MT956952.1 [NCBI]
CDS location
range 19200 -> 20195
strand +
CDS
ATGAGGAAGCTATATCTTGGCAACGGCGATAAAAAGTTCAAATTTGCCGACACCACAACTGAAATACATTTGAATGCGTTCGATGATGGCAGCGCAGCAACATTAACAGCAGATGCAAAGGTCAGAATCAAAAACGACTCTGGATATTTGCTGGGGATAAGTGCCAGTATCACGAACAATCATGCCGTTATTACTAGCGGACAATTGGCTCAATTGCCAGTCGGAAGCTATCTCCTTGAGCTGTGGAACACCGTAGACGGTGGTACTGCAATCTATCCTAGTGATGGATTTTTGGCACTTCAAATCAATGAGAACGTCACTGGTATTTCTGGGGGACTTGTCAGCAGCATCACGGTTGATGACTTCATTCAGCAGTTCAGTGACCTTAGTCAGCAGTTAAAGCAAGAAGTATCTGTTGCTGTTGCCAATGGTCTGAAAGGCGATAAGGGTGCTGATGGACCATCTGCCTATCAAGTCGCGGTCATTAATGGCTATAAAGGCTCGCAAACGGACTGGCTTGCATCTCTCGTTGGCGCTAAAGGTGACAAGGGCGATAAAGGCGATGCGGGGAAAGACTTCCAAATCGTAAAGACGTTCCCGTCCATTGCTCAAATGAATGGTGATGGCTTCTCTGATGGTGATTTCACCATGATTGCCAGTGACGTCAATGATCCTGATGACGGTAAGCTTTACGTATGGAACGGCACCAGTTTCACCTATATTGCCGACTTAAGTGGCTCGCAAGGTATCAAAGGCGACAAAGGTGACAAAGGCGACAAAGGCGACAAAGGTGACAAAGGAGATCAAGGACTTTCTGCATATCAGGTTGCCGTGAATGCTGGCTTCTCTGGAAGTGTCAATCAATGGTTTGCCTCTCTTGTTGGTGCTAAAGGTGACAAGGGTGACAAAGGCGCTGATGCCGTTATCAATATCATCTCGCAAGCAGCTTATGATGCATTAGCCGACAAGTCCGGTGTTTACTTCATTGAGGGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
8da426e62501f8b169f44f98abe58f3d4ef9cc15f65e42d639d7f880c4cbd71e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8393
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Analysis of CRISPR systems of types II-A and I-E in strains of the Lactobacillus casei group Pujato,S., Galliani,V., Irazoqui,J.M., Amadio,A., Quiberoni,A. and Mercanti,D. 2021-07 — GenBank