Protein

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Genbank accession
BDR26170.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,63
TF
Evidence RBPdetect2
Probability 0,75
Protein sequence
MSNLNDFFGSSGSEGGGAEVKRLDDLVDVSVASPTNGQTLVFDNTGWVNRKLSYNDLSNLPSISNTLSGLDDVDTAGTIAGYVLQFNGIKWVGMPASSSISLDDLSNVAITAPSINQTLLFNGSTWYNGSVDFNNLINTPVIPTQLGDLSDVSVSASTQEGSVLVFRTGQWIGSVINYNDLSNTPTIPQNDSFTFLGLSDTNDIPEANGFLKWNNLSTEIEYVTSIPSSAITGLANVATTGLLSNLVDVNVSGVSNGQVLTYNSSSSTWVPTTPSTGGGTSDPTAIFSTDGNTYINTEELVDELVLKTGPGSGNVNVILGGTGKIVVEGQSPEIISETSLKLTGSNLYLNELSWPTTDGTSGQVLATDGNGNLSFITVSSGGTTILINWRGEWEETSYNINDAVSYAGSSYICVAEVAGGNISIPPSNTNLNWNILALKGEDGSFFTYKGTYDSNTEYVDKDVVYYNGSSYVVLDGQGPITGITPTDQSKWGILALAGSGGTGSGFTYKNEYNNSETYQDQDVVSYGGSSYIVSPGNGPVTGILPTDSSIWGIIALKGQDGSGTGNQSLEDLTDVSSATPTSGNVLVANGSSWSSSKLSYSQLQGLPTLSVVATSGSYNDLLDKPSNIGTFIGLSDTDTPSLPNGFLKWNAQGTSISYVQSIPSESISGLATVATTGDYSDLTNTPNIPVMLDDLTDVNLVTPPVTGQALVYNGTYWLAGNAGSGSSTLASLTDVNLTTPTNNQVLSYDNTQNLWINTQIDYDDILNTPSIPVNNSFSLVGLNDTDNSAIPNAFLKWNSTGNSVEYVQSISASSITGLSTVATTGDYNDLTNLPSIPENISDLNDVDTSTAPTDGQILIYSAALGKWIPGDQSGTSPVPGGFPGEWLKINYTPGNLIGTIECSPNISYTIVDNVANNNLTLDLVFANRPYPPAGWMWYGYLVTQGRYVLKMQDTTSHPHTLELTTTENPFGTGTGKLSGFQCRVSTTGAQSYGPLQPTHAYVIFGW
Physico‐chemical
properties
protein length:1006 AA
molecular weight: 105910,77810 Da
isoelectric point:4,05003
aromaticity:0,08648
hydropathy:-0,15089

Domains

Domains [InterPro]
DC_0755
ATT
2–100
DC_0755 DC_1797 DC_0165 DC_0755
DC_0755
ATT
91–158
DC_0755 G3DSA:2.10.10.90 DC_1461
BDR26170.1
1 1006
Architecture
ATT
STR
ATT
ATT 2-158 | STR 167-760 | ATT 761-1006
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BDR26170.1
1 1006
Domain Start End Length (AA) Confidence
N-terminal 1 879 879 0,9978
Central domain 880 995 117 0,0754
C-terminal 996 1006 10 0,9842
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-879
Central
880-995
C-terminal
996-1006

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage sp. 30-3
[NCBI] 		2972143 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDR26170.1 [NCBI]
Genbank nucleotide accession
LC727698 [NCBI]
CDS location
range 175302 -> 178322
strand +
CDS
ATGTCTAATTTAAATGATTTTTTTGGATCAAGTGGATCAGAAGGCGGGGGAGCCGAAGTTAAAAGACTAGACGACTTAGTAGACGTTTCTGTAGCTAGTCCAACTAACGGTCAAACCCTTGTTTTTGACAACACAGGCTGGGTAAACAGAAAACTTAGCTACAATGATTTATCTAATCTTCCGTCTATATCAAACACATTAAGTGGATTAGATGATGTAGACACTGCCGGTACTATAGCCGGATATGTATTACAATTTAACGGAATAAAATGGGTAGGTATGCCTGCCAGTAGTTCCATTTCGTTAGACGATTTATCTAATGTTGCTATCACAGCACCCTCAATAAACCAAACACTGCTATTTAATGGATCAACCTGGTATAACGGATCTGTAGATTTTAATAATTTAATAAACACACCCGTTATTCCTACACAGTTAGGCGATTTGTCAGATGTTTCTGTCAGTGCTTCTACTCAAGAAGGAAGTGTACTAGTTTTTAGAACAGGACAATGGATCGGTTCTGTAATAAATTACAACGATTTGTCAAATACTCCTACTATACCGCAAAACGATTCATTTACATTCTTAGGTTTATCCGATACTAACGATATACCGGAAGCAAATGGGTTTTTAAAATGGAATAATTTAAGTACAGAAATAGAATATGTTACTTCAATTCCTTCGTCTGCTATAACAGGATTAGCCAATGTTGCAACAACCGGTTTATTGTCCAATTTAGTAGATGTGAATGTCAGTGGTGTATCTAATGGCCAGGTTCTAACATATAATTCCTCTTCTAGCACATGGGTTCCTACTACGCCATCGACAGGCGGCGGAACAAGTGATCCTACTGCTATTTTTAGTACAGACGGTAATACGTATATTAATACTGAAGAATTAGTAGACGAGCTAGTTTTAAAAACCGGACCTGGATCCGGAAATGTAAATGTCATTCTCGGTGGCACCGGCAAGATTGTCGTCGAAGGTCAATCTCCGGAAATAATATCGGAAACTAGTTTAAAATTAACAGGTAGCAATTTATATTTAAATGAACTATCTTGGCCTACGACCGACGGAACGAGTGGTCAAGTTTTAGCTACAGACGGAAATGGAAATCTCTCATTTATAACAGTATCGTCCGGTGGAACTACTATACTCATAAACTGGCGCGGCGAATGGGAAGAAACTAGTTATAATATAAACGACGCAGTAAGTTATGCTGGTTCTAGTTATATATGTGTTGCTGAAGTAGCAGGCGGCAATATTTCTATTCCGCCTAGCAATACAAACTTAAATTGGAATATACTAGCACTAAAAGGTGAAGACGGATCATTCTTTACTTATAAGGGAACTTATGATTCTAATACCGAATATGTAGATAAAGATGTAGTTTATTATAACGGTTCATCTTATGTAGTGTTAGACGGGCAAGGACCTATTACAGGAATCACCCCTACTGACCAATCTAAATGGGGTATATTAGCGTTAGCTGGCTCTGGAGGAACAGGCAGTGGTTTTACTTACAAAAATGAATATAATAATTCGGAAACTTATCAAGACCAAGACGTTGTTAGTTATGGAGGATCTTCATACATTGTTAGTCCTGGCAACGGTCCTGTTACTGGTATTTTGCCTACCGATTCTTCTATTTGGGGTATTATTGCACTCAAGGGTCAAGACGGGTCTGGAACAGGTAACCAGTCGCTTGAAGATTTAACTGATGTATCTAGTGCCACTCCTACTTCGGGGAATGTGTTAGTAGCTAACGGGTCATCATGGTCTTCTTCTAAGTTATCATATAGTCAACTCCAAGGTCTACCTACTTTATCTGTAGTTGCTACTTCTGGTAGTTATAATGACTTATTAGATAAACCTTCTAATATAGGAACATTTATTGGATTATCAGATACTGATACTCCTTCCCTACCAAATGGATTTTTAAAATGGAATGCACAAGGAACATCTATATCTTATGTACAATCAATACCTTCAGAATCTATTTCTGGTTTGGCTACTGTTGCTACTACCGGTGATTATAGCGATTTAACTAATACACCTAACATACCAGTTATGTTAGACGACTTAACCGATGTGAATTTAGTTACACCTCCTGTAACAGGTCAGGCTTTAGTATACAACGGTACGTATTGGTTGGCAGGCAATGCTGGAAGCGGTTCGAGCACACTAGCATCATTAACTGACGTTAACTTAACTACTCCTACTAACAATCAAGTATTATCGTATGACAATACACAAAATTTGTGGATTAATACACAAATCGATTATGATGATATTTTAAATACACCTAGTATACCCGTAAATAATAGCTTTAGCTTGGTTGGGTTGAACGACACGGATAATTCTGCTATTCCGAACGCATTCTTAAAATGGAACTCAACCGGGAATTCAGTAGAATATGTTCAGTCTATTTCTGCTAGTAGTATAACAGGATTATCTACTGTTGCTACAACTGGAGACTACAACGACTTAACTAATTTACCTTCTATTCCAGAAAATATAAGTGATTTAAATGACGTAGATACATCTACTGCACCTACTGATGGTCAAATACTCATATATAGTGCAGCACTAGGAAAGTGGATTCCTGGAGATCAAAGCGGTACTAGTCCAGTTCCGGGCGGCTTCCCCGGTGAATGGTTAAAAATCAATTATACCCCTGGCAATTTAATAGGTACAATTGAGTGTTCGCCTAACATATCATACACTATAGTAGATAATGTTGCAAATAATAATCTTACTTTAGATTTAGTATTTGCAAATAGACCATACCCGCCTGCTGGATGGATGTGGTATGGTTACTTAGTAACACAAGGCAGATATGTATTAAAAATGCAAGATACTACTAGTCATCCGCATACGTTAGAGCTTACGACTACTGAAAATCCGTTTGGAACAGGAACTGGAAAATTATCAGGATTCCAGTGCAGGGTATCAACTACTGGAGCCCAAAGTTATGGTCCTCTTCAGCCTACGCATGCATATGTGATATTTGGGTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a30ad4e1455435a89a7a512984f3a1968c5073f458786c0e1de64364fe5d13d8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6029
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole-Genome Sequence of Pseudomonas phage 30-3 Fujiki,J., Nakamura,T., Nakamura,K., Tamamura,K., Ichikawa,N., Ishiguro,Y. and Iwano,H. 2021-07 — GenBank