Protein

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Genbank accession
QBP33012.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MAVGEIQISALPQASLPIELSDIFHLKQGIEDKRCTLEQLLDPHASLRNNPHGVTKVQVELGNVLNALQLVAANNLSDIVDVAEARANLQIMSSDEVNQLIQAHINDKNNPHNTTKSQVGLGNVQNWLASNAYNEDADKYATARAVNSLYRAVQASYPVGTIHLSMNAANPSTYLICGGTWELVSKGRALVGYDSAARPAGSTFGSQTVALTANNIPAHTHSVYVTGGGHSHGTSGQCS
Physico‐chemical
properties
protein length:239 AA
molecular weight: 25373,99850 Da
isoelectric point:6,02234
aromaticity:0,04603
hydropathy:-0,20293

Domains

Domains [InterPro]
DC_1039
STR
1–238
DC_1039
SSF88874
STR
152–231
SSF88874
IPR053827
ATT
154–226
IPR053827
QBP33012.1
1 239
Architecture
STR
ATT
STR
STR 1-153 | ATT 154-226 | STR 227-238 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacteria phage CHB7
[NCBI] 		2530182 Uroviricota > Caudoviricetes > Andersonviridae > Mooglevirus > Mooglevirus CHB7
Host Shigella sonnei
[NCBI] 		624 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBP33012.1 [NCBI]
Genbank nucleotide accession
MK562504 [NCBI]
CDS location
range 38446 -> 39165
strand -
CDS
ATGGCAGTAGGTGAAATTCAAATTAGTGCCTTGCCTCAAGCATCGTTACCAATTGAGCTAAGTGATATCTTCCACCTTAAACAAGGTATTGAGGATAAGAGGTGTACACTTGAACAATTACTTGACCCACACGCATCATTGAGAAATAACCCTCACGGCGTTACAAAGGTTCAGGTTGAATTAGGTAACGTATTAAACGCTTTACAGCTTGTCGCTGCAAACAACCTATCAGATATCGTTGACGTCGCTGAAGCAAGAGCAAACTTGCAAATCATGTCTTCTGATGAAGTTAACCAACTTATTCAGGCTCACATTAATGATAAGAATAACCCTCACAACACAACTAAATCACAAGTCGGTTTAGGTAATGTGCAGAACTGGTTAGCTTCTAACGCATATAATGAAGATGCTGATAAGTATGCTACAGCAAGAGCAGTTAATAGTCTATACAGGGCTGTTCAGGCTTCATATCCAGTTGGGACTATTCACTTGTCTATGAATGCTGCTAACCCATCCACTTACTTGATTTGTGGAGGTACTTGGGAGCTAGTATCAAAAGGTAGAGCACTTGTGGGTTATGACAGTGCAGCTAGACCAGCAGGTTCCACATTTGGTTCCCAAACTGTGGCTTTGACTGCAAACAATATTCCTGCTCACACTCACTCAGTGTATGTTACAGGCGGTGGTCACTCACACGGTACTAGTGGACAGTGCAGCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
9503cbd72f4917cd6121bd8a50d74e4e50ee60b32a0c2e6be916c4bc93fffe93
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8146
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A cornucopia of Shigella phages from the Cornhusker state Doore,S.M., Schrad,J.R., Perrett,H.R., Dover,J.A., Schrad,K.P., Dean,W.F. and Parent,K.N. — — GenBank