Protein

View in Explore
Genbank accession
XCO39839.1 [GenBank]
Protein name
membrane protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MASGLLIDLNDGNPAMQITAGMRCPSFCNLVANAWDEKVVNVDGYVPGAQIIVIPRDPVSIQNRRTNLVPTIGMQSGYSQNGSQLTFSTWWSDNWGRDRLYDLTICQILPTASGQGLYIADSTDFTAIPDSTRAGFCVWAGTITFTGQWRTPDTGYDRNKYMVFARWSADGVTVEYDGNNIYARNETNGDEGDATVTMRVAIFASGVAPQAGTGLNFFNAAGQCTFSTVRRPFIFRNRFYNPSWDYQDIGAGMILLGRYGFRSRVSGARCRAKFAGLMMSGNSVRCASGITKSNWTSRYSVVQDRLVGMSVPIIENMY
Physico‐chemical
properties
protein length:318 AA
molecular weight: 35052,12890 Da
isoelectric point:8,45608
aromaticity:0,11635
hydropathy:-0,18270

Domains

Domains [InterPro]
IPR045604
STR
4–296
IPR045604
XCO39839.1
1 318
Architecture
STR
STR 4-296 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO39839.1
1 318
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0480
Central domain 11 209 200 0,0112
C-terminal 210 318 108 0,9951
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-318

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146036
[NCBI] 		3232216 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO39839.1 [NCBI]
Genbank nucleotide accession
PP889486 [NCBI]
CDS location
range 19794 -> 20750
strand +
CDS
ATGGCAAGCGGTTTACTTATCGATCTCAATGATGGTAATCCGGCGATGCAAATCACGGCGGGCATGCGTTGCCCGTCTTTTTGCAACCTGGTTGCTAACGCGTGGGATGAGAAAGTGGTTAACGTGGATGGATATGTGCCAGGGGCGCAGATTATCGTCATCCCTCGCGATCCAGTATCCATCCAGAACAGAAGGACGAACCTTGTTCCAACTATCGGGATGCAAAGCGGGTACTCGCAGAATGGTTCCCAACTTACGTTTTCTACGTGGTGGTCAGATAATTGGGGGCGTGACCGCCTCTATGATTTGACAATCTGCCAGATCCTGCCGACGGCCAGCGGTCAGGGGTTATACATTGCCGATTCCACCGACTTTACGGCAATCCCCGACTCAACGCGGGCCGGGTTTTGCGTGTGGGCCGGAACGATCACGTTTACAGGGCAATGGCGAACTCCCGATACCGGATACGACCGCAATAAGTATATGGTGTTTGCTCGCTGGAGCGCCGACGGCGTGACGGTCGAATATGACGGAAATAACATCTACGCCAGGAATGAAACGAACGGCGACGAGGGCGACGCTACGGTTACAATGAGGGTGGCGATTTTCGCCAGCGGAGTTGCGCCACAGGCGGGAACCGGATTGAACTTTTTCAACGCGGCGGGCCAATGCACATTCTCCACGGTTCGCCGTCCGTTTATCTTCAGGAACCGATTCTATAACCCGTCGTGGGATTATCAGGACATCGGCGCGGGAATGATTTTGCTTGGCAGGTATGGATTCAGAAGCCGGGTAAGTGGTGCTCGGTGCAGGGCAAAATTTGCCGGGTTAATGATGAGCGGTAACAGCGTAAGGTGTGCCAGCGGAATCACAAAATCTAACTGGACGTCAAGATATAGCGTCGTCCAGGATCGATTAGTCGGCATGAGCGTTCCCATTATTGAAAACATGTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2683910b6b812a3181926742423cbe1d1a09ea4e3e9d5bc7adf45b1ffe2297c1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8607
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank