Protein

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Genbank accession
XHY53865.1 [GenBank]
Protein name
regulator of chromosome condensation
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLPFGRMVKYGNIVPGPKNIIKVGASTQGQFLLTDSHDLYYIGRNQGGESGNGNTNTVSSWILVSADVSNFFVGDRTLVIIKNDNTIWTSGQTYWFSSSTTTSYSTVLVERTNWFTNAIPVSEIANIVCTNGLIFVLSTNSVLYGAGDNGYRGSLGIGSSSIYTLTQCATNVRKVMTNANDSMYLTLDNKLYSSGWNSSGQHGTGNQTQINTWGLRSSGVIDAAIGGNALNYYNGTSYFVCGQTPNFLSSSTTTFRAVPVSTLPNSSPLFMTNSPALNTATQMVITSTYQKGVGANRGLGLNNSQTGAIYSATNLQLPVEVSEIRDVLFSDGLTSILTKNGDVYSTGSYYAIPGASEDVAVFTKIDLPK
Physico‐chemical
properties
protein length:369 AA
molecular weight: 39451,52680 Da
isoelectric point:6,71697
aromaticity:0,10027
hydropathy:-0,08455

Domains

Domains [InterPro]
DC_0918
STR
3–78
DC_0918 DC_0436
IPR009091
STR
8–235
IPR009091
IPR009091
STR
12–350
IPR009091
IPR051553
Unmapped
18–208
IPR051553
DC_0918
STR
71–222
DC_0918
XHY53865.1
1 369
Architecture
STR
RBD
STR 3-350 | RBD 351-369
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XHY53865.1
1 369
Domain Start End Length (AA) Confidence
N-terminal 1 76 76 0,2016
Central domain 77 326 251 0,7088
C-terminal 327 369 42 0,6274
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-76
Central
77-326
C-terminal
327-369

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage JP4
[NCBI] 		3349802 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHY53865.1 [NCBI]
Genbank nucleotide accession
PQ330092 [NCBI]
CDS location
range 115303 -> 116412
strand -
CDS
ATGTTACCTTTTGGAAGAATGGTTAAGTACGGAAATATTGTACCTGGTCCTAAAAATATAATTAAAGTTGGTGCTTCTACACAAGGTCAATTCTTATTGACTGATTCACATGATTTATATTACATAGGTAGAAATCAAGGTGGTGAATCTGGAAATGGTAATACCAACACGGTATCTTCATGGATATTAGTAAGTGCCGATGTTTCTAATTTTTTCGTGGGTGATCGTACACTTGTTATTATTAAAAATGATAATACTATATGGACATCAGGTCAAACGTACTGGTTCTCATCTTCTACGACTACTTCTTACAGTACTGTATTAGTTGAAAGGACTAATTGGTTTACCAATGCTATACCAGTAAGTGAAATTGCTAATATTGTATGTACAAATGGTTTAATATTTGTACTTAGCACTAATTCAGTACTCTATGGTGCAGGAGATAATGGATATCGTGGTTCTTTGGGTATTGGTTCATCATCAATTTATACATTAACTCAATGTGCTACGAACGTTCGTAAAGTAATGACCAATGCGAATGATAGTATGTATCTTACATTAGATAATAAGCTATATAGTTCTGGATGGAATAGTAGTGGGCAGCATGGTACGGGGAACCAAACACAAATTAACACTTGGGGATTGCGTAGTTCTGGTGTAATCGATGCAGCCATTGGTGGTAATGCATTAAATTACTATAATGGTACATCATATTTCGTATGTGGTCAAACTCCAAACTTTCTTAGTTCAAGTACGACTACATTCCGTGCAGTTCCTGTAAGTACTTTGCCTAATAGTTCTCCGTTGTTTATGACGAATTCACCTGCCTTAAATACTGCTACACAAATGGTAATTACTAGTACATATCAGAAGGGTGTTGGGGCGAACCGTGGTTTGGGATTAAACAATTCTCAAACTGGTGCTATATATAGTGCTACCAATTTACAATTACCCGTTGAAGTTAGTGAGATTAGGGATGTTCTTTTTAGTGATGGTTTGACATCGATATTAACCAAAAATGGAGATGTGTATAGTACTGGTTCTTATTACGCCATACCAGGAGCAAGTGAAGATGTTGCGGTCTTTACTAAAATTGATTTACCAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f3c0d2754e74921eb32d5aabfe87b75eaebfcb3b90dac7a77ed80dacbf3847bd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8807
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a novel jumbo phage JP4 with potential to control drug-resistant pathogenic Escherichia coli Zhang,K., Wei,X., He,B., Liao,J., Wang,J., Le,S. and Lu,S. 2025-11-25 — GenBank