Protein

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Genbank accession
YP_010664509.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MALTLQFTEAGLAACLSAKDKGLRAEITHMAFGSNAYTPSKTQTSLSAEKERIAISDYQDGGKSLRMAGVFDGALEYAIKEIGFYIGTTLLGVYSAPNKTLGYRTPAVKVVQWFTLNIEALPTDSITVVVGAENLNLILDKEFIAGCTAFLQNAAAVIKNAHWNMQLSERIRQLEG
Physico‐chemical
properties
protein length:176 AA
molecular weight: 19052,64300 Da
isoelectric point:6,12130
aromaticity:0,08523
hydropathy:0,07841

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shewanella phage vB_SspM_M16-3
[NCBI] 		2866684 Uroviricota > Caudoviricetes > Peduoviridae > Arsenicumvirus M163 >
Host Shewanella sp. M16
[NCBI] 		2830837 Pseudomonadota > Gammaproteobacteria > Alteromonadales > Shewanellaceae > Shewanella >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010664509.1 [NCBI]
Genbank nucleotide accession
NC_070920.1 [NCBI]
CDS location
range 10950 -> 11480
strand -
CDS
ATGGCACTAACACTGCAATTTACTGAGGCGGGCCTTGCCGCTTGCTTGTCAGCAAAAGACAAAGGACTGAGAGCCGAGATCACTCACATGGCGTTTGGCTCAAACGCCTATACGCCCTCTAAAACCCAAACCAGCTTGAGCGCTGAAAAAGAGCGCATTGCCATTTCTGACTATCAAGATGGTGGCAAAAGCCTACGGATGGCTGGCGTATTTGATGGCGCACTAGAGTACGCCATCAAAGAGATAGGGTTTTACATTGGCACAACTTTGCTTGGCGTATACAGCGCACCAAATAAGACACTGGGCTACCGAACCCCAGCTGTAAAAGTCGTGCAGTGGTTTACGTTAAATATTGAGGCGCTGCCAACCGACAGTATCACTGTGGTAGTGGGTGCTGAAAACCTTAACCTGATTTTAGACAAAGAGTTTATCGCGGGCTGTACGGCATTTTTACAAAATGCGGCGGCAGTTATTAAAAATGCTCACTGGAACATGCAACTCAGTGAGCGCATTAGACAACTAGAGGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f9569cb6860872c24aa3dc40b4ad89d4429ff51ac390d7654c838be7b78b563d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7867
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification, Characterization, and Genomic Analysis of Novel Shewanella Virulent Phage from a Gold Mine Bujak,K., Decewicz,P. and Radlinska,M. 2020-09-13 — GenBank