Protein

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Genbank accession
UKZ10837.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MXSVFKEALVFNNGSAPGVSDNPLTWNTAXVESXXGMFCHAXSFNQXVPFDVGNVTTAKEMFSEAAMFNQNVASLQFTKATDLSFIFHDAVAFNNGSADGVNGAMLNWASTNALXBAESMFEGASIFBQXVSLQTXSITNAKAMFKNAPKFDXDMXWFSFGEVLDMSEMFXGATAFTGXGIDFWQTGKXTNMSYMFADAXSFNAXPXTWTFTEVTXMAGMFSGATXHEPRXLXLVXSXDNXSSXKFRLECGLCX
Physico‐chemical
properties
protein length:254 AA
molecular weight: 24544,30250 Da
isoelectric point:4,42124
aromaticity:0,13717
hydropathy:0,05442

Domains

Domains [InterPro]
DC_1935
STR
1–134
DC_1935 IPR005046
IPR005046
STR
24–131
IPR005046
DC_0103
RBD
97–230
DC_0103
UKZ10837.1
1 254
Architecture
STR
RBD
STR
STR 1-134 | RBD 135-161 | STR 162-230 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UKZ10837.1
1 254
Domain Start End Length (AA) Confidence
N-terminal 1 73 73 0,2365
Central domain 74 243 171 0,8356
C-terminal 244 254 10 0,8919
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-73
Central
74-243
C-terminal
244-254

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage C-ZP2022
[NCBI] 		2917416 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UKZ10837.1 [NCBI]
Genbank nucleotide accession
OM319461 [NCBI]
CDS location
range 85438 -> 86202
strand -
CDS
ATGWCWAGCGTCTTTAAAGAAGCTCTCGTGTTTAACAAYGGYTCRGCTCCAGGTGTAAGTGAYAACCCACTGACTTGGAATACAGCTGSSGTTGAAAGTAYGAAWGGYATGTTCTGTCATGCYGYATCGTTCAACCAAGMRGTTCCRTTCGAYGTKGGTAATGTRACTACTGCKAARGAAATGTTYAGTGAAGCTGCAATGTTTAACCAAAACGTAGCRTCACTTCAGTTCACSAAGGCAACKGACCTRTCRTTYATCTTCCATGATGCAGTGGCGTTTAACAACGGCTCGGCAGAYGGYGTRAAYGGMGCGATGYTAAACTGGGCAAGTACRAAYGCACTWRAARACGCAGAGTCTATGTTYGAAGGTGCTTCRATCTTTRACCAAGRAGTATCRCTACAGACTGRMTCGATTACMAAYGCYAAGGCAATGTTYAAGAACGCGCCTAAGTTTGATCRAGACATGMTGTGGTTYAGCTTTGGTGAAGTWCTTGAYATGAGCGAAATGTTCYSTGGYGCAACRGCGTTTACTGGYASWGGYATYGACTTCTGGCAAACKGGTAAAGYAACGAACATGTCTTACATGTTTGCTGATGCYRCWTCGTTCAATGCARTTCCTRTTACWTGGACMTTTACTGAAGTTACAWACATGGCAGGTATGTTCTCTGGAGCAACCTMGCATGAACCAAGAYATCTCTRGYTGGTGTRTTCCKAAGATAACYGTAGCTCCWACAAGTTTCGACTTGAATGCGGGCTTTGCRGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c4a622242f64a123fc0b7a2ca6a5ab53e9c9140cb2799f042f1508edd3de3adc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8290
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50