Protein

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Genbank accession
APD20280.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MEQLVLNINKVPVVEASQFKYSDHIFVSVNGQFKRMKRTDLLTLLSADVKGEKGDRGPIGLQGRTGATGATGATGATGATGDKGVKGDRGDAGFRGWSPVFKSVADSGSIYLYLSDWVGGENTKPDVLGYISPTGIVNYISEGATAINTDFAPQINDLQTSKLDVGSTTSAIPEGSNLYYTDARVRAATLTGLSTATSTAIAATDTVLSAFGKAQAQLNLKQNSASLGTDVQATVLSTYTVGGNTAIANTDTIAAAFGKAQGQINARQLSANLSSDVQALVLSSYVVGSNTALANTDTFIAALGKLQGQINAREVAANVPADVRATVLTGLSTATSTAITATDTVLSAFGKLQAQVNLKQDSSTLAANVRSTTLTGFSATPNSAVVAADTLLAAIGKLQAQVDSLSSRVTALGG
Physico‐chemical
properties
protein length:414 AA
molecular weight: 42285,73600 Da
isoelectric point:6,61386
aromaticity:0,05314
hydropathy:0,03696

Domains

Domains [InterPro]
DC_1033
ATT
1–49
DC_1033 IPR008160 DC_0863 DC_0863
DC_0863
STR
40–229
DC_0863 DC_0863 DC_0863
APD20280.1
1 414
Architecture
ATT
STR
ATT 1-49 | STR 50-413 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage AM24
[NCBI] 		1913571 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APD20280.1 [NCBI]
Genbank nucleotide accession
KY000079.2 [NCBI]
CDS location
range 50780 -> 52024
strand +
CDS
ATGGAACAACTTGTTTTAAATATTAATAAAGTCCCTGTTGTGGAAGCCTCTCAATTTAAATACTCAGACCATATTTTTGTTTCAGTTAATGGTCAATTTAAAAGAATGAAAAGAACTGATCTCCTTACCTTATTGAGTGCTGATGTTAAAGGTGAAAAAGGTGATAGAGGTCCGATTGGTTTACAAGGTAGGACTGGAGCTACAGGTGCAACTGGGGCCACAGGAGCTACAGGTGCAACTGGAGATAAAGGTGTTAAGGGAGATCGTGGAGATGCTGGTTTCCGAGGATGGTCACCAGTCTTCAAATCTGTAGCTGACTCTGGATCTATCTACCTATACCTAAGTGATTGGGTTGGTGGTGAAAATACAAAACCTGATGTTCTAGGTTATATCTCACCTACAGGGATTGTAAACTATATCTCTGAGGGCGCAACTGCAATCAACACTGACTTTGCACCACAAATCAATGACCTTCAAACAAGTAAACTAGATGTTGGCTCTACAACTAGTGCTATCCCTGAAGGTTCAAACTTATATTATACAGATGCACGAGTTCGTGCTGCAACCCTTACAGGTCTCTCTACTGCGACCTCTACAGCTATTGCAGCGACTGATACTGTATTAAGTGCATTTGGCAAGGCACAGGCTCAACTTAACCTTAAACAGAACAGTGCAAGCTTAGGAACAGATGTACAAGCTACAGTTCTATCTACTTACACTGTTGGTGGTAATACAGCAATTGCCAACACTGATACCATAGCAGCAGCTTTTGGTAAAGCTCAAGGGCAAATTAATGCTAGACAACTTTCAGCCAATCTTTCATCTGATGTTCAGGCGTTAGTACTTTCAAGTTATGTTGTTGGTTCTAACACAGCTTTAGCCAATACAGATACTTTCATTGCTGCTCTTGGCAAGTTGCAAGGTCAGATCAATGCTAGAGAGGTAGCTGCCAATGTACCAGCAGATGTTAGGGCAACAGTTCTTACAGGTCTCTCTACAGCGACCTCTACAGCAATTACTGCTACAGATACTGTCTTGTCAGCCTTCGGGAAATTACAAGCCCAAGTCAACTTGAAACAAGACTCATCTACCCTAGCTGCAAATGTAAGATCAACAACCCTTACAGGTTTCTCTGCAACACCAAACTCAGCAGTAGTTGCAGCAGATACACTATTGGCAGCAATAGGAAAATTACAGGCTCAAGTTGATAGTTTATCTTCTAGAGTAACAGCACTAGGAGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
721ff625d018cce684994b513f0d0c5f4ff547bac9ee4c470b1091a4f1a26d79
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6923
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Antibacterial composition for prophylaxis and treatment of hospital infections (variants), strains of bacteriophages, used for obtaining thereof Aleshkin,A.V., Volozhantsev,N.V., Verevkin,V.V., Krasilnikova,V.M., Myakinina,V.P., Popova,A.V. and Svetoch,E.A. 2016-10 — GenBank