Protein

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Genbank accession
WDQ27568.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MATIDLGRLGFVNKGTYNNSTTYEKNDLVQFTDGGVLSTYLYIDSTAQSGQAPSSSGTAGSRWTFFAKGVADAVASAGNNKVLVTNASGNLTPLSIGSAGQVVQVNSGGNGLEFATAQAGITSANLWRMTTSFTGSANPVASNWAEAQYVTSDRITESSGVFTFPSTGFWEISTGWAWYRNNDDRQCTVTIQTTENNSSFTDKGAFDAFFQVTSSNNTHTSAYGSILFDVTNTSTHKIRIKIDTVDGNTNNYAGSSSNRTYVKFIRLGDT
Physico‐chemical
properties
protein length:270 AA
molecular weight: 28791,98430 Da
isoelectric point:5,33698
aromaticity:0,11111
hydropathy:-0,31519

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage EXVC031P Hodr
[NCBI] 		3029570 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDQ27568.1 [NCBI]
Genbank nucleotide accession
OQ414635 [NCBI]
CDS location
range 21504 -> 22316
strand -
CDS
ATGGCTACGATAGATTTAGGAAGATTAGGATTTGTAAATAAAGGTACTTATAACAATAGTACAACTTACGAAAAAAATGATTTGGTTCAGTTTACTGATGGAGGTGTTTTATCTACTTACTTATACATAGATAGCACAGCTCAATCTGGCCAGGCCCCATCATCATCTGGTACTGCTGGATCAAGATGGACATTCTTTGCTAAAGGTGTAGCTGATGCTGTTGCTAGTGCTGGTAACAATAAAGTATTAGTTACAAATGCTAGTGGTAATTTAACTCCATTATCTATTGGTTCTGCTGGACAAGTAGTACAAGTTAATAGTGGTGGTAATGGTTTAGAATTTGCAACAGCACAAGCTGGTATTACCTCAGCAAATCTTTGGAGAATGACAACATCATTTACTGGAAGTGCTAATCCTGTAGCCTCAAATTGGGCTGAAGCACAATATGTTACTAGTGATAGAATAACAGAAAGTTCTGGTGTTTTTACTTTTCCATCTACAGGGTTTTGGGAAATATCAACTGGTTGGGCTTGGTATAGAAACAATGATGATAGACAATGTACTGTTACTATTCAAACTACAGAAAATAATAGCTCATTTACAGATAAAGGAGCTTTTGATGCTTTTTTTCAAGTAACCTCTAGTAACAATACTCACACTTCAGCATATGGAAGTATTTTATTTGATGTTACTAATACATCAACACACAAAATAAGAATTAAAATTGATACTGTTGATGGTAATACAAATAATTATGCTGGTAGTTCATCTAACAGAACATATGTAAAATTTATAAGATTAGGAGATACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0197cbe149d9426ca8566d59cfe4ae768435fd2d6e5fda826c5b39d0d4e1bc87
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8205
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Draft Genome Sequences of Pelagipodophages Hodr EXVC031P and Baldr EXVC032P, Isolated from the Sargasso Sea Lewis,P.J., Buchholz,H.H., Michelsen,M.L. and Temperton,B. 2014-05 — GenBank