Protein

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Genbank accession
WBF82647.1 [GenBank]
Protein name
hinge connector of long tail fiber protein distal connector
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,76
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MADLKAGSTTGGAVIWHQGNFPLMPAGDDVLYKTFKLYSEYNKPQAADNDFVSKANGGTYAARVTFNNGVQIPYAINNTNQSGIFPGNGDAATFVTANIDIVSWYGIGFKSSQGSAGRTVVINTRNGDINTKGVVSAAGQVRSDMTAPVAANDLTRKDYVDGRINIVTDNANSRVLRKGDTMTGTLTAPNFFSQNPASEANHVPRFDQIVIKDSVQDFGYY
Physico‐chemical
properties
protein length:221 AA
molecular weight: 23677,94430 Da
isoelectric point:6,72106
aromaticity:0,09955
hydropathy:-0,33122

Domains

Domains [InterPro]
DC_0466
STR
1–219
DC_0466
IPR005601
STR
56–195
IPR005601
WBF82647.1
1 221
Architecture
STR
STR 1-219 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WBF82647.1
1 221
Domain Start End Length (AA) Confidence
N-terminal 1 122 122 0,3935
Central domain 123 210 89 0,1656
C-terminal 211 221 10 0,8559
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-122
Central
123-210
C-terminal
211-221

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage a20
[NCBI] 		3017791 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBF82647.1 [NCBI]
Genbank nucleotide accession
OQ067374 [NCBI]
CDS location
range 59844 -> 60509
strand +
CDS
ATGGCCGATTTAAAAGCTGGTAGTACAACTGGCGGTGCCGTTATATGGCATCAAGGTAATTTCCCTTTAATGCCAGCAGGTGATGACGTCCTGTATAAAACGTTTAAACTCTATTCAGAATATAATAAACCACAAGCGGCTGATAACGATTTCGTTTCTAAAGCAAATGGTGGTACGTATGCCGCTCGAGTAACATTTAATAATGGTGTGCAAATACCATATGCTATAAACAATACAAACCAAAGCGGTATTTTTCCTGGTAACGGTGATGCAGCTACTTTTGTTACAGCAAATATTGACATCGTTTCGTGGTATGGTATTGGTTTTAAATCATCACAAGGATCCGCCGGGAGAACTGTAGTAATCAATACACGTAATGGTGATATTAATACAAAAGGCGTTGTGTCGGCAGCTGGTCAAGTAAGAAGCGATATGACTGCTCCGGTTGCAGCAAATGATCTCACAAGAAAAGATTATGTTGATGGACGAATAAATATTGTTACGGATAACGCAAATTCCCGTGTATTGCGTAAAGGCGATACCATGACTGGTACTTTAACAGCACCAAACTTTTTCTCACAGAATCCGGCGTCTGAGGCTAATCATGTTCCTCGTTTCGACCAGATTGTAATTAAAGATTCTGTTCAAGATTTCGGCTATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6d346e08085c005bf0c09dccccd0794632e00aa4e369e25eee58ef60328f5ffb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6972
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Development of a CRISPR-therapeutic designed to reduce E. coli in hematological cancer patients Placeholder,P. 1998 — GenBank