Protein

View in Explore
Genbank accession
AXH68356.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTKARDLADIVSNLSANAEKAVVVNAGGTELTFGDAGSSDLYGFVKTNGTGSQKEDLVVHYTNGTDNLSVAHNNSTQDDLYDETMMGKRGLSFTVDANGNLNVTV
Physico‐chemical
properties
protein length:105 AA
molecular weight: 11046,91650 Da
isoelectric point:4,43636
aromaticity:0,05714
hydropathy:-0,34857

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXH68356.1
1 105
Domain Start End Length (AA) Confidence
N-terminal 1 16 16 0,9688
Central domain 17 94 79 0,0512
C-terminal 95 105 10 0,9363
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-16
Central
17-94
C-terminal
95-105

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC021P
[NCBI] 		2282994 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter ubique HTCC1062
[NCBI] 		335992 Bacteria > Proteobacteria > Alphaproteobacteria > Pelagibacterales > Pelagibacteraceae > Candidatus Pelagibacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXH68356.1 [NCBI]
Genbank nucleotide accession
MH579717 [NCBI]
CDS location
range 36677 -> 36994
strand +
CDS
ATGACAAAAGCAAGGGATTTGGCTGACATAGTCAGTAATTTAAGTGCAAACGCAGAGAAAGCGGTTGTAGTTAACGCAGGTGGAACAGAATTAACATTTGGAGACGCAGGTTCTTCAGATTTATATGGATTTGTAAAAACGAATGGCACAGGTTCTCAAAAAGAGGATTTAGTCGTTCACTATACAAATGGTACAGATAATTTATCTGTAGCTCACAACAACAGTACCCAAGATGATTTATATGATGAAACCATGATGGGGAAAAGAGGACTTTCGTTTACTGTAGATGCCAATGGCAACTTAAACGTAACAGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
58afa8c88d96ae24c0ece84790da155f03931a941aaf4413ab4e66a9f1f3923a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4565
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50