Protein

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Genbank accession
AZB66807.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,54
Protein sequence
MNYKYKDIHANINELGVDIGYIGANFYSKDVGTASIRINIFWNGQPFDLSNANYQPQLNLFCEDGSVFMDEPLEIISPYSGLIQYKVTDKVIRHSGKVKAKLFLLNENTSIHALNFMFNIVDSGIDQTISKEVNVDLVYTAIKDALKSKLFDMDELKKVMSDVVLDNKDNLKLDEPKKSSMFEGKTGVFVGDSITEKNFRTTTNYHEFIASRTGLNVINMGISGTGYQDRKNVALQIKEQPDFICVFLGTNDYGLVGDKTNPLGTVEERDYRTVAGSIYFTLLQLTNHFPNTPIVVMTPLPRIECYPLKEVANDAGYTLGQLVDVIKNISKLFGLPVLDLYHESNLRVWEPAVNKTFFAYEEGQEDGLHPNEKGHEFISNSIQSFLEKYAVSPKFENKVDLPPDQVLENGTVVKHLYPTGIFWKENQSFIINFDESEISLDNKKILKIESQKASILNASGTLQNSPYWYTIPNNTDEYNRVADVTQFTDSLTKTGYTTERGFEYLPELLKVTYADDANNSVVAEPNSNSTEAEDTSEVAASNDEISNDNIAPTEEAVNPIDNGDGTYIASVVPNRIFRDPSGLFGIAINRTALNLEDKSVVKIELGNEVLLNPEYVPNTIYWSGVNGRSTDEVERFISHLVIRGERNPGSAQEFKNQAIKITYRNN
Physico‐chemical
properties
protein length:666 AA
molecular weight: 74801,95590 Da
isoelectric point:4,80519
aromaticity:0,09910
hydropathy:-0,37928

Domains

Domains [InterPro]
IPR018913
ATT
6–139
IPR018913 SSF52266
IPR018913
ATT
6–125
IPR018913 IPR036514 DC_0605
G3DSA:2.60.40.3350
ATT
18–127
G3DSA:2.60.40.3350 IPR036514
IPR051532
Unmapped
187–398
IPR051532
cd00229
ENZ
188–385
cd00229
IPR013830
ENZ
189–376
IPR013830
AZB66807.1
1 666
Architecture
ATT
STR
RBD
ATT 6-139 | STR 180-397 | RBD 398-664 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AZB66807.1
1 666
Domain Start End Length (AA) Confidence
N-terminal 1 276 276 0,8023
Central domain 277 605 330 0,5172
C-terminal 606 666 60 0,4579
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-276
Central
277-605
C-terminal
606-666

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage phiSP119-2
[NCBI] 		2491317 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus pseudintermedius
[NCBI] 		283734 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZB66807.1 [NCBI]
Genbank nucleotide accession
MK075005.1 [NCBI]
CDS location
range 36545 -> 38545
strand +
CDS
ATGAATTATAAATATAAAGATATACACGCAAATATCAACGAATTAGGTGTCGATATTGGATATATCGGTGCTAATTTTTATTCAAAAGATGTAGGTACTGCATCGATAAGAATTAATATTTTTTGGAATGGTCAACCTTTTGACTTATCAAATGCAAACTATCAGCCACAATTAAATTTATTTTGTGAAGATGGTTCTGTTTTTATGGATGAGCCACTTGAAATCATTTCCCCTTATTCCGGCTTAATTCAATACAAGGTTACTGACAAAGTGATTCGACATTCAGGTAAAGTGAAAGCTAAGTTATTTTTATTGAATGAAAATACTTCTATACACGCATTAAATTTTATGTTCAATATTGTCGATAGTGGTATCGACCAAACAATTTCTAAAGAAGTTAATGTTGATTTAGTATATACCGCTATTAAAGACGCGTTGAAATCTAAATTATTTGATATGGATGAATTAAAAAAAGTTATGTCTGACGTCGTATTAGATAACAAAGATAATTTAAAACTTGATGAACCTAAAAAGTCATCAATGTTTGAAGGGAAAACAGGTGTCTTTGTTGGTGATAGTATCACTGAAAAGAATTTCAGAACAACAACGAACTATCATGAATTTATTGCTTCAAGAACTGGTTTGAATGTCATTAATATGGGGATTAGTGGCACAGGCTATCAAGACCGAAAGAATGTTGCCTTACAAATTAAGGAACAGCCAGACTTTATTTGCGTTTTTTTAGGTACAAATGATTATGGTCTAGTAGGTGATAAGACAAATCCTTTAGGGACTGTTGAGGAACGTGACTATCGAACTGTTGCAGGCAGTATTTATTTTACTCTATTGCAGCTAACAAATCATTTTCCTAATACACCTATTGTAGTGATGACGCCGCTTCCGAGAATAGAATGTTATCCATTAAAAGAAGTGGCTAATGATGCAGGTTATACATTAGGTCAACTAGTAGATGTCATTAAAAATATTTCGAAATTGTTTGGTTTACCTGTTTTGGATCTTTATCATGAAAGCAATTTAAGAGTTTGGGAACCTGCTGTAAATAAAACATTTTTTGCGTATGAAGAAGGTCAAGAAGATGGTTTACATCCAAATGAAAAGGGCCATGAATTCATATCGAATAGCATTCAATCATTTTTAGAAAAATATGCAGTAAGTCCAAAGTTTGAAAACAAAGTGGATTTGCCACCTGATCAAGTTTTAGAAAACGGAACTGTCGTTAAGCATCTTTATCCTACTGGCATTTTTTGGAAAGAAAATCAAAGTTTTATTATAAATTTTGATGAATCAGAAATAAGTTTAGATAACAAGAAAATATTAAAAATAGAAAGTCAAAAGGCATCTATTCTGAATGCTTCGGGCACACTTCAAAATTCGCCATACTGGTATACGATTCCAAATAATACAGATGAATATAATCGTGTTGCCGATGTAACACAATTTACTGACAGTTTAACTAAAACTGGTTATACGACTGAGCGCGGGTTTGAATATTTACCTGAATTGCTAAAAGTCACATATGCCGATGACGCTAATAATAGTGTTGTAGCAGAACCAAATTCTAACTCAACAGAAGCTGAAGACACTTCTGAAGTAGCAGCAAGTAATGATGAAATTTCCAATGACAATATTGCGCCTACAGAAGAAGCAGTAAATCCTATTGATAATGGTGACGGCACATATATTGCTTCAGTTGTGCCAAATCGAATTTTTAGAGATCCAAGCGGATTGTTTGGAATCGCTATTAACCGTACAGCATTAAATTTAGAAGATAAAAGTGTTGTAAAGATTGAGTTAGGTAACGAAGTTTTATTAAATCCGGAATATGTACCAAATACAATTTATTGGAGTGGTGTCAATGGTAGGTCTACCGATGAAGTTGAGCGATTTATTAGTCATTTAGTAATTAGAGGAGAAAGAAATCCAGGAAGTGCACAAGAATTTAAAAATCAAGCAATCAAAATTACGTATAGAAACAACTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
ebfc3aa4506e41335d3dbc1eca34e0462cf1e04d57ca122b62666cd75ad4f919
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7037
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophage of Staphylococcus pseudintermedius Wipf,J.R.K., Deutsch,D.R. and Fischetti,V.A. 2014-10 — GenBank