Protein

View in Explore
Genbank accession
XQQ56819.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,84
Protein sequence
MALKTKIIVQQILNIDDTTTTASKYPKYTVVLGNSISSITAGELTSAVEASAASAAAAKGSEIAAKDSENKAKDSEIMAGIHADSSQTSATQSAASAAESEKQARLSQKSADASATSAEESKGFRDSAELAAQNAENSRRLAEQAKTAAQQAQTAAETAKAGAETAKAGADAAATTAGEHAAAAKQSELNAKESEVNAAGSATKAEGKAIDATTEADRAKAEADRATQIVDSKLDKEDISGFIKVYKTKAEADADVGSRVLGEKILVWNQTDSKYGWYKVAGTAEAPVLELVEIEQKLVSINNVRADDAGNVQITLPGGNPSLWLGEVTWFPYDKDSGVGYPGVLPADGREVLRVDYPDTWEAIEAGLIPSVSEAEWQAGAILYFSTGDGSTTFRLPDMMQGQAFRAPIKGEENGGAIKEQIPYITTVNGIGPADNTGAIKLPYVAMVNGAIIPDENGNLALGNVVTKNVWNGTDGEVLLRGAFGLGGVGITLNEPDIVSFFKAMRAFGSGYYRNDTGVQGLPAYSAGFYSRVADTNSFICSGYGSAVVFAAAINDAGLDSENPIVHTNILYGTVNKPDLNGDTQGVLSLAKGGTGATTVSSAKTNLEVDRVKQLEGGTHITSQDQNIVFMVQDTKNWGVYDHSENKWVSLPVEHGGTGATEPAQARKNLEAASAGINFDITQLRNLEGWPISIKNGSVISRKYHAVPSAGSYVGSEVFSAQVQLDNSVDPDTPRLEALFYSEGNYGQSLTERATIAAYRRTADGSLTATKYANLYMDSGAWNAERMHTQGYQKTWDGDSFGFFAPFQASDVVDNDSGFVPIISARTQSTGGYPMRATTGLISRGIDWPAYVFRLRGDSNWACTYQFHMSGDINGWGTDYNNTVFNFTYTKNAVSDINLKDNIQDVSGEESLENIEKMEFKKFTYKFDKKKNIRRGVIAQQLELIDPQYVKAIGNPETDDITLTLDTNPLLMDALAAIKVLSERNKSLETKLHEMSTVIDNINEKLDLMTRLSNLEAELDKMKGTS
Physico‐chemical
properties
protein length:1026 AA
molecular weight: 109698,41590 Da
isoelectric point:4,83651
aromaticity:0,07505
hydropathy:-0,35624

Domains

Domains [InterPro]
DC_0608
ATT
2–585
DC_0608 IPR030392 Coil
Coil
Unmapped
125–155
Coil Coil DC_0195
IPR030392
CHP
895–992
IPR030392
XQQ56819.1
1 1026
Architecture
ATT
STR
ATT 2-585 | STR 586-1026
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage HMD-P5
[NCBI] 		3400944 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQQ56819.1 [NCBI]
Genbank nucleotide accession
PV016700.1 [NCBI]
CDS location
range 49449 -> 52529
strand +
CDS
ATGGCGCTTAAAACTAAAATTATTGTACAGCAGATTCTGAACATAGATGACACTACAACTACTGCTAGTAAGTATCCTAAATATACAGTAGTTTTAGGAAATTCTATTAGCTCTATTACTGCTGGTGAATTAACTTCTGCTGTAGAAGCCTCCGCTGCTTCTGCGGCAGCAGCAAAAGGTTCTGAAATTGCTGCTAAAGATTCTGAGAATAAAGCAAAGGACTCCGAAATTATGGCGGGTATCCATGCAGATTCTTCCCAAACATCAGCTACTCAATCTGCAGCTTCAGCAGCAGAATCTGAGAAACAGGCTAGACTATCCCAGAAGAGTGCAGATGCTTCTGCTACATCAGCGGAAGAGTCTAAAGGATTTAGAGATTCTGCTGAACTAGCTGCTCAGAATGCTGAGAACAGTCGTAGACTTGCAGAACAAGCTAAAACTGCTGCTCAACAAGCTCAGACAGCGGCTGAAACTGCTAAGGCTGGCGCTGAAACCGCAAAAGCTGGAGCAGATGCTGCTGCTACAACTGCTGGAGAACACGCTGCTGCTGCTAAGCAATCAGAATTAAATGCTAAGGAATCTGAAGTTAATGCTGCGGGTTCTGCTACCAAAGCTGAGGGCAAAGCTATTGATGCTACTACTGAGGCAGATCGTGCTAAAGCTGAGGCAGATCGTGCAACTCAGATTGTTGATAGTAAGTTGGATAAAGAAGATATATCTGGCTTTATCAAAGTCTACAAGACTAAAGCCGAAGCCGATGCGGATGTTGGAAGTCGTGTACTAGGGGAGAAGATCCTAGTATGGAATCAAACTGATTCAAAATATGGGTGGTATAAGGTCGCTGGTACTGCCGAGGCTCCTGTTCTAGAATTAGTAGAAATAGAGCAAAAGCTAGTTTCTATTAATAACGTTCGTGCAGATGACGCGGGTAACGTACAGATTACTCTTCCTGGTGGTAACCCCTCTTTATGGCTGGGTGAAGTTACTTGGTTCCCTTATGATAAAGATTCAGGTGTTGGCTACCCTGGTGTTCTTCCTGCTGATGGTCGTGAAGTTCTTCGTGTAGACTATCCAGATACTTGGGAAGCTATTGAAGCTGGTCTAATTCCTTCTGTTTCAGAAGCTGAATGGCAAGCCGGTGCAATCCTATACTTCTCTACTGGTGATGGTTCTACAACCTTCCGTTTACCAGATATGATGCAAGGGCAGGCTTTCCGTGCACCTATTAAGGGAGAAGAAAATGGTGGTGCTATCAAGGAACAAATCCCTTATATCACTACTGTGAATGGAATTGGTCCTGCTGACAATACTGGAGCTATTAAGCTTCCTTACGTGGCGATGGTTAATGGAGCTATTATACCAGATGAGAACGGGAACCTAGCACTAGGTAACGTTGTTACTAAGAACGTTTGGAATGGTACTGATGGAGAAGTTCTACTTCGTGGTGCTTTTGGTTTAGGCGGTGTTGGTATTACGTTAAATGAACCTGATATAGTATCATTTTTCAAGGCTATGAGAGCTTTTGGTTCTGGGTATTATCGCAACGATACCGGAGTTCAGGGCTTGCCAGCGTATTCTGCAGGTTTCTACTCCAGAGTAGCAGATACTAACTCATTTATCTGTTCTGGGTATGGTAGTGCCGTAGTATTTGCAGCTGCAATCAATGATGCTGGTTTAGATAGTGAAAACCCTATTGTTCATACTAATATTCTTTATGGTACTGTTAACAAGCCAGATCTAAATGGTGATACTCAAGGTGTCTTAAGTCTAGCTAAAGGTGGTACTGGAGCTACCACAGTTAGTTCCGCCAAAACTAACCTAGAAGTGGATAGAGTAAAGCAGCTAGAAGGAGGAACACATATAACCTCTCAGGATCAAAATATAGTGTTTATGGTCCAAGACACTAAAAACTGGGGAGTATACGACCATTCTGAGAACAAGTGGGTATCTTTACCTGTTGAGCATGGCGGTACTGGAGCTACTGAGCCAGCTCAAGCTAGAAAAAACTTAGAGGCTGCAAGTGCTGGTATTAACTTCGATATTACTCAGCTACGTAATCTGGAAGGTTGGCCTATTAGTATTAAGAATGGTAGTGTTATTTCCCGTAAATATCACGCGGTTCCTTCGGCGGGATCTTACGTAGGATCGGAGGTTTTTTCTGCACAAGTCCAGTTGGATAATTCGGTGGATCCAGACACACCTCGTTTAGAGGCGCTATTTTATTCAGAAGGTAATTATGGCCAATCTCTTACCGAAAGAGCTACGATAGCTGCCTATAGACGTACTGCAGACGGTTCCTTAACCGCTACTAAATATGCTAATCTGTATATGGATTCTGGGGCTTGGAATGCAGAGCGCATGCATACTCAAGGATACCAGAAGACATGGGATGGGGATTCATTTGGTTTCTTCGCTCCTTTTCAAGCTTCTGACGTAGTAGATAATGATAGTGGGTTTGTACCTATTATTAGTGCTCGTACTCAATCTACAGGTGGTTATCCGATGAGAGCTACTACTGGATTAATATCCCGGGGCATTGATTGGCCTGCCTATGTATTTAGACTAAGAGGGGACTCTAACTGGGCATGCACCTATCAGTTTCATATGTCAGGGGATATTAACGGATGGGGGACAGACTATAATAACACTGTCTTTAATTTTACCTATACTAAAAATGCAGTATCTGATATCAATCTAAAAGATAATATTCAGGATGTATCGGGTGAAGAATCTCTTGAAAATATTGAAAAAATGGAGTTCAAGAAATTCACCTATAAGTTTGATAAGAAAAAGAATATTAGACGTGGTGTTATTGCACAACAATTAGAGTTGATTGATCCTCAATACGTTAAAGCTATTGGCAACCCTGAAACCGACGATATTACTTTAACTCTAGATACCAATCCATTGTTAATGGATGCTTTAGCTGCTATTAAAGTATTATCTGAAAGAAATAAGTCTCTTGAGACTAAATTACACGAGATGTCTACTGTTATTGACAACATTAACGAAAAGCTTGATTTGATGACTAGATTATCAAATTTAGAAGCAGAGTTAGACAAAATGAAAGGTACTAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bd54dedd5012f103bf55cc6dffd3269b84b3c09425c9e808573b38ea3bf7bb2b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5829
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50