Protein

View in Explore
Genbank accession
XCD08701.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MVKKILLGNFKGPKGNTGPTGPTGPKGDKGSKGDTGPAGKDGKDGNIETPTTILNKLKEVDGAGSGLNADLVDDEHSETFARQEILETTMDDLKNTRLVMGRLSDLAGEDGVKLELNYGNSVYGKIISSNPEINTGENVVINFIVNGVSYERTTDANGRAILPIRLDPGSYMLEGIVKRGAAGENPRLEQTRLLIVH
Physico‐chemical
properties
protein length:197 AA
molecular weight: 20945,32380 Da
isoelectric point:5,32254
aromaticity:0,03553
hydropathy:-0,50609

Domains

Domains [InterPro]
G3DSA:1.20.5.320
STR
11–65
G3DSA:1.20.5.320
DC_0806
STR
11–184
DC_0806
XCD08701.1
1 197
Architecture
STR
STR 11-184 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Methanobrevibacter smithii tailed virus 1
[NCBI] 		3148917 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Methanobrevibacter smithii ATCC 35061
[NCBI] 		420247 Methanobacteriota > Methanobacteria > Methanobacteriales > Methanobacteriaceae > Methanobrevibacter > Methanobrevibacter smithii

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCD08701.1 [NCBI]
Genbank nucleotide accession
PP537965 [NCBI]
CDS location
range 36308 -> 36901
strand +
CDS
ATGGTTAAAAAAATATTACTGGGGAATTTCAAAGGCCCTAAAGGCAATACTGGACCAACAGGACCAACAGGTCCTAAAGGTGATAAAGGAAGTAAAGGTGATACTGGACCTGCAGGAAAAGATGGTAAAGATGGAAACATTGAAACACCCACCACTATTTTAAATAAATTAAAAGAAGTGGATGGAGCAGGTTCAGGTTTAAATGCAGATTTGGTGGATGATGAACATTCTGAAACATTTGCAAGACAAGAAATATTAGAAACCACAATGGATGATTTAAAAAACACTAGATTAGTAATGGGTCGCTTATCAGACCTTGCTGGAGAAGATGGAGTTAAACTAGAATTAAATTATGGAAATTCTGTTTACGGTAAAATTATTTCTTCCAATCCTGAAATTAACACAGGGGAAAATGTGGTAATTAATTTTATTGTAAATGGTGTTTCTTATGAAAGAACAACTGATGCTAATGGTAGAGCAATACTGCCGATTAGATTAGACCCTGGAAGTTATATGTTGGAAGGTATTGTAAAAAGAGGAGCTGCTGGAGAGAATCCTCGTTTAGAACAAACAAGATTACTGATTGTACATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
67297e3e2f68b3d4b7436dbfdb49656a38c47df48323b61b58d502950942a48a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6815
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Archaeal virus exists in stable equilibrium with its dominant human gut methanogen host Baquero,D.P., Medvedeva,S., Martin-Gallausiaux,C., Pende,N., Sartori-Rupp,A., Tachon,S., Pedron,T., Debarbieux,L., Borrel,G., Gribaldo,S. and Krupovic,M. 2024-09-04 — GenBank