Protein

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Genbank accession
WPJ67582.1 [GenBank]
Protein name
long tail fiber protein proximal connector
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MEKFMAEFGQGYVQTPFLSESNSVRYKISIAGSCPLSTAGPYVKFQDNPVGSQTFSAGLHLRVFDPSTGALVDSKSYAFSTSNDTTSAAFVSFMNSLTNNRLVAILTNGKVNFPPEVVSWLRAAGTAAFPSDSILSRFDVSYAAFYTSSKRVIALEHVKLSNRKSTDDYQTILDVVFDSLEDVGATGFPKRTYESVEQFMSAVGGTNNEIARFPTSSAISKLSDYNLVPGDVLYLKAQLYADADLLALGTTNISIRFYNASNGYISSTQAEFTGQAGSWELKEDYVVVPENAVGFTIYAQRTAQAGQGGMRNLSFSEVSKNGGISKPAEFGVNGIRVNYICESASPPDIMVLPTQASSKTGKVFGQEFREV
Physico‐chemical
properties
protein length:371 AA
molecular weight: 40121,39990 Da
isoelectric point:5,27070
aromaticity:0,11321
hydropathy:-0,11914

Domains

Domains [InterPro]
DC_0912
STR
1–371
DC_0912
PS52031
LEC
22–192
PS52031
IPR039477
STR
58–116
IPR039477
WPJ67582.1
1 371
Architecture
STR
STR 1-371
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPJ67582.1
1 371
Domain Start End Length (AA) Confidence
N-terminal 1 68 68 0,6647
Central domain 69 267 200 0,4090
C-terminal 268 371 103 0,5434
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-68
Central
69-267
C-terminal
268-371

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage JoYop
[NCBI] 		3093947 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPJ67582.1 [NCBI]
Genbank nucleotide accession
OR769032 [NCBI]
CDS location
range 59068 -> 60183
strand +
CDS
ATGGAAAAATTTATGGCAGAGTTTGGACAAGGATATGTCCAAACGCCATTTTTATCGGAAAGTAATTCAGTAAGATATAAAATAAGTATAGCGGGTTCTTGTCCGCTTTCTACAGCAGGACCATATGTTAAATTTCAGGATAATCCTGTTGGAAGCCAAACATTTAGCGCAGGACTTCATTTAAGAGTTTTTGACCCTTCCACCGGAGCATTAGTTGATAGTAAGTCATATGCTTTTTCGACTTCAAATGATACTACATCAGCTGCTTTTGTTAGTTTCATGAATTCTTTGACGAATAATAGACTTGTTGCTATATTAACTAACGGAAAAGTTAATTTTCCTCCTGAAGTAGTGTCTTGGTTAAGAGCCGCAGGAACGGCTGCTTTTCCATCTGATTCTATATTGTCAAGATTCGACGTATCATATGCTGCTTTTTATACTTCTTCTAAAAGAGTTATCGCGTTAGAGCATGTTAAACTAAGTAATAGAAAAAGCACAGATGACTATCAAACTATTTTAGATGTTGTATTTGATAGTTTAGAAGACGTTGGAGCTACGGGATTTCCTAAAAGAACATATGAAAGTGTCGAGCAATTCATGTCAGCGGTCGGTGGAACCAATAACGAAATTGCACGTTTTCCAACTTCATCCGCGATAAGTAAACTCTCTGATTATAATTTAGTTCCTGGTGATGTTCTTTATCTTAAAGCTCAGTTATATGCTGATGCGGATTTACTTGCGCTTGGAACCACAAATATATCCATCCGTTTTTATAATGCATCTAATGGATATATTTCTTCAACACAAGCTGAGTTCACCGGACAAGCTGGGTCTTGGGAATTAAAGGAAGATTATGTAGTTGTTCCAGAAAACGCTGTGGGATTTACGATATACGCACAAAGAACTGCACAAGCTGGTCAAGGTGGCATGAGAAATTTAAGCTTTTCTGAAGTGTCAAAAAATGGAGGTATTTCGAAACCTGCTGAATTTGGCGTCAATGGAATTCGTGTTAATTATATCTGTGAATCTGCTTCACCTCCGGATATAATGGTACTTCCTACACAAGCATCGTCTAAAACTGGTAAAGTGTTTGGGCAAGAATTTAGAGAAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
857941523b2703e58a832a2040d688b8662c1356482a0b1af7bd3dfc959f5579
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6688
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Escherichia phage Carena and JoYop Addablah,A., Kakou Ngazoa,S., Adioumani,E., Gunathilake,D., Tremblay,D. and Moineau,S. 2024-03-12 — GenBank