Protein

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Genbank accession
UUW39729.1 [GenBank]
Protein name
putative tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPTYPATNSVEASALLVDASNKMHEIVNEDALTEITTESGPVPSVRKALADTFLFVEPIAWNQGSNEETFNQLRTFGDETYWAPTASLANPVPMGVTPVGDSNWKLAPTGKNESIIKQWDTEAQEDLLPLGSSLFKGDDGDYLKDGDTVPAGNTHLRVLIGGKPTIIAMSPVASGTVSLLTEISATIGTTPVSFYSPLTANFSSVDDMLAAQTMVGGRYCTGNTDWKKTDDSNGNILDFEPLNALHIDDFGVENINTMFTLGADIIFGHNKVYTFDTLWRGIQDNITINLNKSTIRRGDSLIGGDFSYSPESQFLLVDGEVIRGVTIENGTFDMRIHEFDEVMNVCANLNTGGRLIGWSFKNIVGIDVRTICTSYNNASGMDNILVEDCEIVSTIPILIAQKVPYAIFAGVQVTNTTVRKCKTDKSSFHLAIFDSDVAQAYPCSNNLIEECRAIGTYDTSIYFYGDGNTARDNYIEDAGKDALKVNATTYHESKNNFFINNEIVGGAGLVQSDGGVMIVLAGRNNVAAYNKCRPSKEATAIAYTPTVIVTEGFENRVEFNHLENESEFRWNMVAVKQFANSITPEEGQVVRGNYIRGKLGYCLSFDASGVYFARVEDNDFDFSDIGMYIERTLADPAMISDDLYMTLKNNKFNAIYDGVTEPYSILASANISKVFYSGNVHKGYRQRDLRSNVGFVGVDNRADENMDSVFINNWSVVPSGSKFTVIPTYGTWGKGDVVGDGVDEFKCTDSGTQGTLTGVTASTTAGSKTITLNSTSAMQYGKFISLAGETGKFCVSEVIDSTTIKVNKAPTNTATGVSVDFYNATFVSIIVP
Physico‐chemical
properties
protein length:832 AA
molecular weight: 90489,09180 Da
isoelectric point:4,58994
aromaticity:0,09615
hydropathy:-0,15697

Domains

Domains [InterPro]
DC_0194
STR
1–832
DC_0194
IPR058969
ATT
11–106
IPR058969 IPR011050
UUW39729.1
1 832
Architecture
STR
ATT
STR
STR 1-10 | ATT 11-106 | STR 107-832
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UUW39729.1
1 832
Domain Start End Length (AA) Confidence
N-terminal 1 251 251 0,9887
Central domain 252 715 465 0,9892
C-terminal 716 832 116 0,9742
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-251
Central
252-715
C-terminal
716-832

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VPMCC14
[NCBI] 		2968382 No lineage information
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UUW39729.1 [NCBI]
Genbank nucleotide accession
ON922990 [NCBI]
CDS location
range 27854 -> 30352
strand +
CDS
ATGCCTACATATCCTGCTACAAATAGTGTGGAGGCTTCTGCTTTATTGGTGGATGCCTCTAATAAAATGCACGAGATAGTTAACGAAGATGCATTAACAGAAATTACAACTGAAAGTGGTCCTGTTCCAAGTGTAAGAAAAGCTTTAGCAGATACATTTTTATTTGTCGAGCCTATTGCTTGGAATCAAGGAAGTAACGAAGAAACTTTTAATCAGTTAAGAACTTTTGGAGATGAAACTTATTGGGCACCAACAGCTTCGCTGGCAAATCCGGTGCCAATGGGGGTTACTCCTGTCGGAGATAGTAATTGGAAACTTGCTCCAACTGGTAAGAATGAAAGTATTATTAAACAATGGGATACTGAGGCGCAAGAGGATTTATTACCACTTGGATCATCGTTATTCAAAGGTGATGACGGAGATTATCTAAAAGACGGTGATACAGTACCAGCAGGAAATACACACCTTCGCGTTTTGATTGGCGGTAAGCCAACCATTATTGCAATGTCGCCTGTTGCTAGTGGTACGGTTAGTTTACTAACTGAAATTAGTGCAACAATTGGTACTACACCCGTATCATTTTACTCCCCTTTAACTGCAAACTTCAGCAGTGTTGATGACATGCTTGCAGCACAAACTATGGTTGGTGGAAGGTATTGTACAGGTAACACAGACTGGAAAAAGACAGATGACAGTAACGGAAATATCTTAGATTTTGAACCATTAAATGCCCTGCACATTGATGATTTTGGTGTTGAAAATATAAACACCATGTTTACATTGGGTGCGGATATTATCTTCGGTCACAATAAGGTTTACACATTTGACACGTTATGGCGCGGAATTCAAGACAACATAACAATTAACTTGAATAAGTCAACTATCCGTCGAGGTGATTCATTGATTGGAGGTGACTTTTCCTATTCTCCAGAATCACAGTTCTTACTTGTAGATGGAGAAGTTATCAGGGGTGTAACTATTGAAAATGGAACCTTTGATATGAGGATTCACGAATTTGACGAAGTTATGAATGTCTGCGCCAACCTTAATACTGGAGGTCGATTAATTGGTTGGTCGTTTAAGAATATCGTAGGGATAGACGTAAGAACTATCTGTACATCTTATAACAACGCAAGTGGTATGGATAACATCCTTGTAGAAGATTGTGAGATAGTTAGTACTATTCCAATCTTGATTGCACAGAAAGTACCTTACGCAATTTTTGCAGGTGTACAAGTAACAAATACTACTGTAAGAAAATGTAAGACTGATAAATCAAGCTTCCACCTAGCTATCTTTGATTCAGACGTAGCTCAAGCATACCCTTGCAGTAACAACTTAATAGAGGAGTGCAGAGCTATAGGTACTTATGATACATCCATCTACTTCTACGGCGATGGGAATACTGCAAGAGATAACTACATAGAAGATGCTGGCAAAGATGCTTTGAAAGTCAATGCTACAACCTACCACGAGTCAAAGAACAACTTTTTCATTAACAATGAGATTGTTGGAGGAGCTGGACTAGTGCAGAGTGATGGCGGTGTTATGATAGTCCTTGCAGGACGTAATAACGTTGCAGCCTATAATAAGTGTAGACCATCTAAGGAAGCTACAGCTATTGCATACACCCCGACTGTTATTGTAACAGAAGGCTTTGAAAATAGAGTAGAATTCAACCACCTTGAGAATGAGTCCGAATTCAGATGGAACATGGTAGCTGTTAAGCAGTTTGCTAACAGTATCACGCCAGAAGAAGGTCAGGTTGTTCGCGGGAATTATATAAGAGGTAAACTTGGTTATTGCTTATCGTTTGATGCAAGTGGTGTTTACTTTGCAAGGGTTGAGGATAATGATTTTGACTTCTCTGACATTGGTATGTACATAGAGAGAACACTTGCAGATCCTGCAATGATATCTGATGACTTGTATATGACGCTCAAGAACAACAAATTTAACGCAATATATGACGGAGTTACAGAACCTTACTCTATCCTAGCATCAGCTAATATTAGTAAAGTGTTCTACTCTGGTAATGTTCATAAGGGATACAGACAACGTGACCTGAGAAGTAATGTTGGTTTCGTGGGTGTTGATAACAGAGCTGACGAGAATATGGATAGTGTCTTCATTAACAATTGGTCTGTAGTGCCATCTGGTTCTAAGTTCACAGTAATACCTACTTACGGAACATGGGGAAAAGGTGATGTAGTAGGTGATGGTGTAGATGAGTTCAAATGTACTGATAGCGGTACTCAGGGAACATTGACAGGTGTAACTGCCAGTACTACAGCAGGAAGTAAGACTATAACACTCAACAGCACATCTGCAATGCAGTACGGCAAGTTTATCTCCTTAGCAGGTGAGACAGGTAAGTTCTGTGTTTCTGAAGTTATTGATTCAACTACTATCAAAGTTAACAAAGCCCCTACGAATACAGCGACAGGTGTTTCTGTTGACTTTTATAATGCAACATTTGTAAGTATAATAGTTCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
185784b6f9f36711b36ea90fea8f5aba916b6115b00cd969f3d9be32adf8e0c3
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2717
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Nucleotide Sequence of Vibrio phage VPMCC14 Kar,P. and Ghosh,K. 2023-12-03 — GenBank