Protein

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Genbank accession
YAF81053.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MATAKITPNASTWTQVSDGTSLKTLQVTHGSVYLCDSPSAPTGNNAHIIYQGNMVVLTPPTVGWVKAINSDATVIVS
Physico‐chemical
properties
protein length:77 AA
molecular weight: 8029,01120 Da
isoelectric point:6,68815
aromaticity:0,05195
hydropathy:0,12078

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage CBDS-02
[NCBI] 		3459906 Viruses >
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAF81053.1 [NCBI]
Genbank nucleotide accession
PX104388.1 [NCBI]
CDS location
range 131260 -> 131493
strand -
CDS
ATGGCAACTGCTAAGATCACACCAAACGCAAGTACATGGACGCAAGTCTCAGACGGCACATCTTTGAAAACTCTTCAAGTGACTCACGGTTCTGTGTATCTGTGTGATAGCCCCAGCGCTCCAACGGGTAACAACGCGCATATCATATATCAAGGAAATATGGTCGTTTTAACCCCGCCGACGGTGGGATGGGTTAAGGCAATTAATTCTGATGCGACAGTTATCGTTTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
112d75b6fface2c53a7f7a87898061d73dfcc51cd5b17d1cfd0556ad0c7a3f40
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9199
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A machine learning approach to predict strain-specific phage-host interactions Camejo,P.Y., Leon,L.E., Rojas,F., Ossa,A., Hurtado,R., Tichy,D., Pieringer,C., Pino,M., Mora-Uribe,P., Ulloa,S., Norambuena,R., Tobar-Calfucoy,E., Aguilera,M., Rojas-Martinez,V., Cifuentes,O., Sabag,A., Cifuentes,N., San Martin,D., Infante,C., Cifuentes,P. and Pieringer,H. — — GenBank