Protein

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UniProt accession
A0A8S5VPE4 [UniProt]
Protein name
Collagen triple helix repeat protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MGTLRGEKMAFKKITDADLQGKGNVGRPDTPGVSTAEMQRIMDEIPREVIVPIFNQLVTALNEMALEKRTHNEGGCLYIRLNSDRVIETSSDGKTWQATGSSGHLILDDGGEEMPQRSRMQFIGATITDNGGVTQITLRKGDTGAQGPQGPVGPQGPQGAQGNIGPQGPQGVQGPRGAQGLTGAQGPTGATGPTGPQGPRGEKGVDGTSFVVLGRYNSLTLLEGARPTGNKGDAYAVGSETDNVVYIWDVEAKKWNPIGSLQGPQGPQGAQGPQGATGETGPQGPRGEVGPDGPQGIQGEKGETGERGPQGIQGLTGEQGPIGATGPQGEKGDPGVIQNVNGKTGESVWLKAEDVGAENKHSYKTVTVAASSWTTGDYTVSWDDGSTTSYTTCASVTVAGVTADSRIAVSDRTRATDAVRMVAALEPGAGEVKFYANSAPTSAAVFVLEVSQ
Physico‐chemical
properties
protein length:452 AA
molecular weight: 46505,74820 Da
isoelectric point:4,94030
aromaticity:0,04425
hydropathy:-0,54956

Domains

Domains [InterPro]
DC_0575
ATT
9–145
DC_0575 DC_2298 IPR008160 DC_1264
IPR008160
STR
140–195
IPR008160 DC_1065
IPR050149
Unmapped
140–345
IPR050149
G3DSA:1.20.5.320
STR
180–220
G3DSA:1.20.5.320
A0A8S5VPE4
1 452
Architecture
ATT
STR
RBD
ATT 9-145 | STR 146-335 | RBD 355-452
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ackermannviridae sp
[NCBI] 		2831612 Uroviricota > Caudoviricetes > Pantevenvirales >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAG94354.1 [NCBI]
Genbank nucleotide accession
BK035339 [NCBI]
CDS location
range 1307 -> 2665
strand -
CDS
ATGGGAACTTTAAGGGGTGAGAAAATGGCATTTAAAAAAATTACAGACGCAGATTTACAAGGAAAAGGTAATGTAGGGCGGCCAGACACGCCGGGCGTATCTACCGCAGAGATGCAACGCATTATGGATGAAATACCGCGAGAAGTCATTGTGCCGATTTTCAACCAGCTTGTGACGGCCCTGAACGAAATGGCGCTTGAAAAACGCACCCACAATGAGGGCGGCTGCCTGTATATCCGGCTGAACAGCGACAGGGTCATTGAGACGAGCAGCGACGGCAAGACCTGGCAGGCTACCGGCAGCAGCGGTCATTTGATACTGGACGATGGCGGCGAGGAAATGCCGCAGCGAAGCCGGATGCAGTTTATAGGCGCGACCATTACGGACAATGGCGGCGTGACACAGATAACGCTGCGCAAAGGTGATACCGGCGCACAAGGGCCGCAAGGCCCCGTAGGCCCGCAGGGGCCGCAGGGCGCACAGGGCAATATTGGCCCGCAGGGGCCGCAGGGCGTACAGGGACCGCGCGGCGCGCAGGGTTTGACCGGCGCACAAGGGCCTACCGGCGCAACAGGCCCGACCGGTCCGCAAGGGCCGCGGGGTGAGAAAGGCGTAGACGGCACGAGCTTTGTTGTGCTGGGGCGCTACAACAGCCTAACGTTGCTAGAAGGAGCACGCCCAACCGGCAACAAGGGCGACGCTTACGCGGTGGGCAGCGAGACAGACAACGTTGTGTACATTTGGGATGTGGAGGCCAAGAAATGGAACCCAATCGGCAGCTTGCAAGGCCCGCAGGGGCCGCAGGGCGCACAGGGACCACAAGGCGCTACCGGTGAGACAGGCCCGCAGGGGCCGCGTGGTGAAGTTGGCCCGGATGGGCCGCAGGGCATCCAGGGAGAAAAGGGGGAAACCGGCGAGCGAGGTCCACAGGGCATCCAGGGCTTGACAGGCGAGCAAGGTCCAATTGGCGCGACAGGCCCGCAGGGTGAGAAAGGTGACCCGGGTGTTATCCAGAACGTGAACGGCAAGACAGGGGAATCGGTATGGTTGAAAGCGGAGGATGTGGGCGCAGAAAACAAGCATAGCTACAAAACCGTTACGGTGGCAGCCAGCTCCTGGACTACCGGTGATTACACGGTGTCCTGGGACGACGGCAGCACGACCAGCTACACCACCTGCGCTTCCGTGACTGTTGCAGGTGTGACGGCGGACAGCCGGATTGCCGTAAGTGACCGCACGAGAGCGACGGACGCGGTGCGAATGGTAGCCGCGCTGGAACCCGGAGCCGGGGAGGTTAAGTTTTATGCGAACAGTGCGCCGACAAGCGCGGCGGTGTTTGTTTTGGAGGTGAGCCAGTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)
GO:0030020 extracellular matrix structural constituent conferring tensile strength Molecular Function IEA:TreeGrafter (UniProt)
GO:0030198 extracellular matrix organization Biological Process IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
9ef913f481f4627b13d84d6a77c0e199c40bcd7f5367ccd2608bc3cf59fdabdc
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6375
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50