Protein

View in Explore
Genbank accession
WYM31521.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSYTYTINTGDGTTTVFPFSFAGQDNGYLRVTDIQVYVNKVNTPFTIIISDPNKVVLSQAPASGAEVLIRRIMPKDTPYADFARGNPFSQDTLNNTNLQMLYNIQEIYDGYLPDGFFFRQDIDMHGFKFINLGPGSESGDSVNFDQYNTEVIRNNTQDGRLVILEDAITTSTIVNYVSQLYQSVSGGETTINTTNGLHAAALYINGLFQHKAEGAYMQTGGVVTLAEPLIAGDSVYLILGSDLPGEALYASIDSVAQLNSLVSTINSNLTALTGRVTTVEGKVTTIEGSYAKKGANTDITSITGLTTPLALSQGGVGSTTDTGARANLSAAKIGVNSDITQLATLTGGVTGLTTGTAASSGIVGEVLTAVSASAVATSSGVSVNLATLSLPAGEWELSDSVQITNSGNVTTLSFGTSTTSVTLPTNWFEQYKITTTVAAGNSIRQGATRRIRVTSTTTLYLVANITFTGTNTALGYIRAQRVR
Physico‐chemical
properties
protein length:483 AA
molecular weight: 50933,19090 Da
isoelectric point:4,78717
aromaticity:0,07660
hydropathy:0,01905

Domains

Domains [InterPro]
DC_1263
ATT
1–315
DC_1263
IPR005604
ATT
3–110
IPR005604 G3DSA:1.20.5.340
DC_1647
STR
289–483
DC_1647
WYM31521.1
1 483
Architecture
ATT
STR
ATT 1-315 | STR 316-483
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage VL73
[NCBI] 		3136638 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia sp.
[NCBI] 		558 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYM31521.1 [NCBI]
Genbank nucleotide accession
PP556867.1 [NCBI]
CDS location
range 32142 -> 33593
strand +
CDS
ATGAGTTACACTTACACTATCAACACTGGTGATGGGACAACAACTGTTTTCCCTTTCTCCTTTGCTGGTCAAGATAATGGTTACTTACGGGTAACCGATATTCAGGTATATGTTAATAAGGTAAATACCCCATTTACTATTATCATCAGTGACCCTAATAAAGTTGTACTTTCACAAGCCCCAGCAAGCGGGGCTGAAGTTCTTATCAGGCGTATCATGCCTAAAGATACACCATATGCAGATTTTGCTAGAGGTAATCCCTTCAGCCAAGACACCCTAAATAACACTAACTTGCAGATGTTGTATAACATCCAAGAGATTTATGATGGATACTTGCCAGATGGGTTCTTCTTCCGTCAGGATATTGACATGCATGGGTTTAAGTTTATAAACCTCGGCCCCGGAAGTGAGTCAGGTGATTCAGTTAATTTTGACCAGTACAATACAGAGGTTATCCGTAATAATACCCAGGACGGAAGGTTGGTCATCCTTGAGGATGCTATAACAACAAGTACTATAGTTAATTATGTATCCCAGCTCTACCAGTCAGTATCTGGCGGTGAGACGACAATCAACACAACCAATGGCCTACACGCAGCTGCGCTATATATTAATGGCCTCTTCCAGCATAAGGCAGAGGGTGCTTATATGCAGACTGGTGGAGTAGTTACACTGGCCGAGCCTCTTATAGCTGGTGACTCTGTTTATCTAATCCTTGGTTCAGACCTACCCGGCGAAGCACTCTATGCAAGTATTGATAGCGTAGCTCAACTAAATTCTTTGGTTAGCACAATCAATAGCAACCTGACAGCCCTCACAGGGAGGGTTACTACTGTCGAGGGTAAAGTTACTACAATAGAAGGTAGCTATGCTAAAAAGGGTGCAAACACTGACATTACATCTATCACTGGTCTAACAACACCATTGGCATTAAGTCAGGGAGGGGTTGGCTCCACTACTGATACAGGTGCAAGGGCTAATTTGTCAGCAGCTAAGATTGGTGTGAACAGTGATATTACACAGTTAGCTACTTTAACTGGCGGTGTTACTGGCCTTACGACTGGCACAGCTGCATCATCTGGCATTGTTGGCGAGGTTCTTACAGCTGTATCTGCATCAGCTGTTGCAACCTCTTCAGGTGTATCAGTTAACTTAGCAACACTTTCACTACCAGCTGGAGAATGGGAGCTGTCTGATTCGGTACAGATTACTAACTCAGGTAATGTAACTACGCTCAGCTTCGGTACGTCAACAACTAGCGTGACGTTACCCACTAACTGGTTTGAGCAGTACAAGATTACAACTACCGTAGCAGCTGGTAATAGTATCCGTCAGGGTGCTACTCGTCGTATTCGTGTTACATCAACTACTACACTCTACTTGGTTGCCAATATCACTTTCACTGGCACTAACACAGCCCTCGGCTATATCAGGGCGCAGAGGGTAAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
79a12627f6d04ebb7a53872c715aa82260a76ae176930a8368aa4e4298592248
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7829
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Could bacteriophages be used as a novel pest management tool to control gut endosymbionts in Western Flower Thrips? Krueger,S., Kroj,A., Lehnherr,T., Lehnherr,H. and Stuiver,M. 2024 — GenBank