Protein

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Genbank accession
DBB24061.1 [GenBank]
Protein name
Phage Tail Collar Domain
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MPQPKLLSKPWAADGLKNSIPVTRNGSLAQEAATYAEGFPNITMTPISVGGKPPSGKDMNGILHEISAHTVWQNQGGRYRFDQAFCDAIGGYPKGAVLINDASDTEYISLVDANTHNPNSGNNTGKWSVHAGKGLKASTTQAGIVQLSSATNSDREDMAATPKAVKAAYDKAVEAAANDLPSGAVMYFAGQTAPAGWLKADGAAVSRTTYAALFAAIGTTYGTGDGRNTFNLPDLRAEFVRGWDDGRGVDSGRAFGSAQGHAVANHYHPTGVFWSDNDDLTMPRETEYGNKTSMQAGDPAAVVLGASQGGANQKNYHLDANLANNKGSGNNWALTTRTDHMTVAQGGGETRPRNIAPPACIKI
Physico‐chemical
properties
protein length:363 AA
molecular weight: 38053,60820 Da
isoelectric point:6,50064
aromaticity:0,07438
hydropathy:-0,47218

Domains

Domains [InterPro]
DC_1413
STR
11–363
DC_1413
IPR051934
Unmapped
137–173
IPR051934 SSF88874
IPR005068
STR
138–178
IPR005068 IPR011083
IPR037053
ATT
171–236
IPR037053
DBB24061.1
1 363
Architecture
STR
ATT
STR
STR 11-170 | ATT 171-240 | STR 241-363
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteriophage sp
[NCBI] 		38018 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DBB24061.1 [NCBI]
Genbank nucleotide accession
BK070131 [NCBI]
CDS location
range 35284 -> 36375
strand +
CDS
ATGCCACAGCCAAAACTGCTCTCCAAACCTTGGGCGGCGGACGGTCTGAAAAACAGTATCCCCGTCACCCGCAACGGCTCTCTGGCGCAGGAGGCCGCCACCTATGCCGAGGGTTTCCCAAACATCACGATGACCCCGATTTCAGTCGGCGGCAAACCGCCCAGCGGCAAAGACATGAACGGCATATTGCACGAAATCAGCGCGCACACCGTTTGGCAAAACCAAGGCGGGCGCTACCGCTTTGACCAAGCCTTTTGCGATGCCATCGGTGGCTATCCCAAAGGCGCAGTGCTCATCAATGATGCATCAGACACCGAATACATCAGCCTAGTGGATGCCAACACCCACAACCCGAACAGTGGCAACAATACAGGGAAATGGTCGGTACATGCGGGCAAAGGACTGAAAGCCAGCACCACACAGGCCGGCATTGTACAGCTCTCATCTGCCACCAACAGCGACCGCGAAGATATGGCCGCCACGCCTAAAGCAGTTAAGGCGGCCTACGACAAGGCGGTAGAAGCTGCCGCAAACGATTTGCCCAGCGGCGCCGTGATGTATTTCGCCGGCCAAACCGCACCGGCAGGCTGGCTCAAAGCCGACGGTGCCGCCGTATCCCGCACCACTTATGCCGCGCTGTTTGCCGCCATCGGTACTACCTACGGCACCGGCGACGGGCGCAACACCTTCAACCTGCCAGACCTGCGCGCCGAATTTGTGCGCGGCTGGGACGATGGGCGCGGCGTGGACAGCGGGCGTGCCTTCGGTTCGGCACAGGGGCATGCCGTTGCCAATCACTACCACCCAACAGGGGTATTTTGGTCGGACAACGATGATTTAACCATGCCGCGCGAAACCGAATACGGTAACAAAACCTCAATGCAGGCCGGCGACCCGGCTGCCGTTGTATTGGGCGCAAGTCAAGGCGGTGCCAATCAGAAGAATTATCACTTGGATGCCAATTTGGCCAACAACAAAGGCAGTGGCAACAACTGGGCGCTGACCACCCGCACCGACCATATGACTGTTGCTCAAGGCGGCGGCGAGACTCGCCCGCGCAACATCGCGCCGCCCGCCTGCATCAAGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
afcbc394651de67729f537e8413dba797ee0a27979ed74f0c7cb67c6a3d8a79a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8074
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50