Protein

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Genbank accession
XYO05428.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MALILHYTRNEDGTFDRKRYNVPPMEYVVANIPDGVPVRIYRGEIGDDTDVTENFEALKEDDVFHIIEGAGGGGGFLGKLLDPLGVLKFITKLISPSQKTPKTSLANQQAESPNNSLTDRNNKPRPYERSYDICGRVQTIPNDLMTTYKVFNDAGVVVEYGYYDAGRGYLDIKAEDITDGDTKVQEITGTSVAVYAPFTSPNNTNTPQLLVGDPINQNLYITIASNEVDGAVLKAQNDIRVNPSDTGEISLQGVTGVVRDNTGDSAFSEILSVGDIAVFNLILVKDVANVSGSYTVTYVDDFEVRVAAGGMLSEWQKLPSGFTPLTQGTEAWISPSNTYDKSLTDWTTLNRLEIERVVANIAAANGMYKDNGSKLRTSVTVELQYQLLDETGVPYGDVYSKQAVISGRSADYTGVTIYADLPVRSKVRVRARRVTNLDLSFEGTVVDEVSYINLYGQIRDTTPHYGNRTTVHSARKQTPRAAEIKQPQLRMIATEMVYKYLGNGAFDTVMTPNTQAIQSLIRLARDPAVGNLNLTTSNMDKLLATQTEIENYFGNAEAGQFCYTFDDYKMTMQDIISTIADAIFCTPYRKGQDILLDFERPRMGPEMVFTHRSKTTASEKWTRTFNDAQVYDSLKFSYIDPDTNVKETISIPAEGGVNTETYDSKGIRNYRQAYWAAYRRYQKNLLKKVTVSFTATEEGVFVLPGRAISVVKGSRVAPQDGYVVAVNGLTLTLSQPVTFTPGDDHSLILKKRDGGVQSVAVVPGSHEREVVMLSAPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGINYEADFYKYDGVAPFGSGFSGGFSNGFS
Physico‐chemical
properties
protein length:850 AA
molecular weight: 93641,76960 Da
isoelectric point:5,06222
aromaticity:0,09294
hydropathy:-0,33612

Domains

Domains [InterPro]
DC_0118
STR
1–683
DC_0118 DC_0808
NF040662
Unmapped
355–830
NF040662
XYO05428.1
1 850
Architecture
STR
RBD
STR 1-683 | RBD 702-843 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYO05428.1
1 850
Domain Start End Length (AA) Confidence
N-terminal 1 232 232 0,9921
Central domain 233 431 200 0,5204
C-terminal 432 850 418 0,1242
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-232
Central
233-431
C-terminal
432-850

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_GZMU_E2010
[NCBI] 		3448160 Viruses > unclassified bacterial viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYO05428.1 [NCBI]
Genbank nucleotide accession
PV845598 [NCBI]
CDS location
range 14488 -> 17040
strand -
CDS
TTGGCGCTGATATTACATTACACCCGTAACGAAGACGGTACTTTTGACCGCAAACGGTATAACGTACCTCCGATGGAATACGTCGTTGCTAACATCCCAGACGGGGTACCTGTGCGTATTTACCGCGGCGAGATTGGTGATGATACAGACGTAACGGAAAACTTCGAAGCGCTGAAAGAAGATGACGTTTTCCATATCATCGAGGGCGCTGGCGGCGGTGGTGGTTTTCTGGGTAAACTCCTGGACCCTTTGGGTGTGCTTAAATTTATTACCAAGTTGATTTCTCCGTCGCAGAAAACGCCTAAAACGAGTTTAGCGAACCAGCAGGCGGAGTCTCCAAACAACAGCCTGACGGACCGAAACAATAAACCGCGTCCGTATGAACGGTCGTATGATATTTGCGGCAGGGTCCAGACTATCCCTAATGACCTCATGACTACGTATAAGGTCTTCAATGACGCAGGTGTGGTAGTCGAATACGGCTACTATGACGCCGGTCGTGGGTATCTTGATATTAAAGCCGAAGACATCACCGACGGCGATACTAAAGTACAGGAGATTACGGGAACTTCTGTAGCGGTATACGCCCCATTTACGTCCCCTAACAATACAAATACGCCTCAGCTTCTGGTAGGGGATCCTATTAATCAAAATCTATACATAACTATTGCCTCGAACGAGGTAGATGGGGCCGTTCTTAAAGCGCAGAACGACATCAGGGTTAATCCTAGTGATACCGGTGAGATTTCATTGCAGGGGGTAACTGGTGTCGTCCGCGATAACACTGGCGACTCTGCTTTCTCTGAGATTTTATCAGTTGGGGACATAGCTGTTTTTAACCTTATTCTGGTAAAAGACGTGGCTAACGTCAGTGGTAGCTATACCGTTACATACGTAGATGACTTTGAGGTAAGAGTAGCCGCCGGAGGGATGTTGTCAGAATGGCAAAAATTGCCATCAGGATTCACTCCTTTAACGCAAGGTACCGAAGCATGGATTTCACCATCTAACACCTACGATAAGTCGTTAACGGACTGGACCACTTTAAACCGCCTGGAAATTGAACGCGTAGTAGCCAACATCGCGGCCGCGAATGGTATGTATAAAGACAACGGCAGTAAATTGCGCACGTCGGTAACTGTCGAGCTTCAGTATCAACTCCTTGATGAAACTGGCGTGCCGTACGGGGATGTTTACTCAAAACAGGCCGTTATATCAGGTCGTTCTGCGGATTACACAGGTGTTACTATTTACGCCGACTTGCCCGTGCGGTCTAAAGTTAGAGTGCGCGCCCGCCGTGTTACTAACCTTGACCTTAGTTTCGAGGGGACCGTGGTAGACGAGGTTTCCTACATCAACCTTTATGGGCAGATCCGCGACACTACGCCGCATTATGGCAATCGTACCACAGTACACTCTGCGCGTAAGCAGACGCCGCGGGCCGCGGAGATTAAGCAGCCGCAACTACGTATGATTGCCACAGAGATGGTGTACAAATACCTCGGCAACGGCGCATTCGACACTGTTATGACGCCGAATACTCAGGCGATTCAGTCCTTAATCCGTCTTGCCCGCGACCCGGCAGTAGGTAATCTCAACCTAACAACATCCAATATGGACAAGTTGTTAGCGACTCAGACCGAGATAGAAAACTATTTCGGTAACGCAGAGGCCGGCCAATTCTGCTACACTTTTGACGATTATAAAATGACCATGCAGGATATCATCAGCACAATAGCTGATGCTATTTTCTGCACTCCATATCGTAAAGGGCAGGACATATTACTGGATTTCGAGCGCCCTCGTATGGGGCCGGAGATGGTATTCACCCACCGCAGCAAAACCACAGCTTCTGAAAAGTGGACGCGCACATTCAACGACGCACAGGTATACGATAGTCTCAAGTTTTCATACATCGACCCAGATACTAACGTCAAAGAGACTATTAGCATCCCGGCCGAAGGAGGTGTTAATACCGAAACGTACGACTCTAAGGGTATCCGTAACTATCGACAGGCGTATTGGGCAGCTTATCGACGTTACCAGAAAAACTTGTTGAAGAAAGTCACGGTGTCCTTTACGGCGACAGAAGAAGGAGTTTTTGTGCTGCCGGGTCGCGCAATAAGCGTCGTTAAAGGTTCGCGCGTAGCGCCTCAAGACGGCTATGTTGTTGCCGTTAATGGTCTTACTCTGACGTTATCACAGCCTGTCACATTTACTCCGGGTGACGACCACTCTTTAATCCTTAAGAAGCGCGACGGCGGTGTTCAGAGCGTCGCGGTAGTTCCCGGAAGTCACGAACGGGAAGTGGTTATGCTCTCTGCGCCTCAGGAGGCGATATACACAGGGAATAGCGCACTAAAAACTGAGTTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACAGTTGACCCTGGAGACGACAGAACGGTTAAGATTACTGGGATTAACTACGAAGCAGATTTCTATAAATACGACGGCGTCGCACCTTTCGGTAGCGGTTTCTCCGGCGGATTCAGCAACGGTTTTAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2e31bf9c3fa0cacdf759e29ab64a9902f1284a35fc0558f183c380abda916c6d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8442
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50