Protein

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Genbank accession
ALY07240.1 [GenBank]
Protein name
baseplate wedge subunit and tail pin
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MKELINIGNSVDDGTGDHLRLAGRKINNNTQEIYTKLGDGESIFSAGSWQRYSDTNNALELKFGDAYTINTTENSVTVILPKGTVQDYGKVIKLRDVNGSWSQNPVIVSPASGDTVKGNAFPTELWRNFLDAELVYCAPGNWEYASNKLVSGIVANDNTSVIRKEFIAEDGQTDFVDISDIAYNVTATEVYRRGNLLYYGDNIDENTDFGSIPAIESSPIQTTLTLSAVDNWRGYDSTKSMGNITIDSLDGEFIESISTRIDDDTLNVIKFTSGLINENTVCVIEHNNILYFFHYDESSRSYINTEHEAKALFDDANLTIKLYTYNVTKLDGRTIRLVDPCMKGDTVVIVSYVDGIASYRSSYERASLTMYDYDSTDSNITTVNGQRWVGELKNKFTFTLNDFGFLDSVTYNPKSLEVLINGRCLIRGGEADNPAFVCDGAEGNDADTCVSNGGLWVLSGGDYSIIQNEMGMWRDFVINEPLEHGDIVTVRWFNNDIGTLLDWEGEDGIQELGDGRWVQSGDEYERKNNIAYTDPQQPNSKTAVVTSTVVNQSVSNVQDIFDMLYPVGTIYKNAHNPNNPADYMGFGVWVRYAQGRTIVSFNQDNPNDPNFGINNQDLDVNGNPRPVAGGHVGAVSQTLTENNIPQLSSNDFSLIKNDNGDVLIGGCQYDPDEEGPGFKKYSEKKINVREGSTSNSFSVIQPSVTAHVWLRVQ
Physico‐chemical
properties
protein length:713 AA
molecular weight: 79034,08460 Da
isoelectric point:4,42187
aromaticity:0,09818
hydropathy:-0,43324

Domains

Domains [InterPro]
IPR036240
STR
1–214
IPR036240 IPR054430 IPR053827
DC_2238
STR
1–690
DC_2238
IPR008987
ATT
2–148
IPR008987
IPR027411
Unmapped
49–150
IPR027411
ALY07240.1
1 713
Architecture
ATT
STR
ATT
ATT 1-148 | STR 149-559 | ATT 560-712 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ALY07240.1
1 713
Domain Start End Length (AA) Confidence
N-terminal 1 421 421 0,8649
Central domain 422 620 200 0,2410
C-terminal 621 713 92 0,8660
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-421
Central
422-620
C-terminal
621-713

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VmeM-32
[NCBI] 		1775142 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio metschnikovii
[NCBI] 		28172 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALY07240.1 [NCBI]
Genbank nucleotide accession
KU160494 [NCBI]
CDS location
range 187776 -> 189917
strand -
CDS
ATGAAAGAATTAATTAATATTGGCAACTCGGTAGATGATGGCACTGGCGATCATCTACGATTAGCTGGTAGAAAAATAAACAACAACACCCAAGAGATTTATACCAAACTAGGTGACGGAGAATCGATATTCTCGGCCGGTTCTTGGCAAAGGTATAGTGACACTAATAACGCACTTGAATTGAAATTTGGTGATGCTTATACCATTAATACAACCGAGAATAGTGTAACTGTGATTCTACCTAAAGGAACAGTGCAAGATTATGGTAAAGTCATTAAATTGCGTGACGTGAATGGTAGTTGGTCACAGAATCCCGTGATAGTGTCTCCTGCTAGTGGAGATACTGTGAAAGGAAATGCGTTCCCTACTGAATTGTGGAGAAATTTTTTAGATGCGGAATTGGTGTATTGTGCTCCCGGTAATTGGGAATACGCATCCAACAAATTAGTATCTGGAATTGTTGCCAACGATAACACGTCAGTAATACGAAAAGAATTCATAGCAGAAGATGGACAAACAGATTTTGTTGATATTTCGGATATTGCATATAATGTTACTGCTACCGAAGTATATCGTCGAGGTAACTTATTATATTATGGTGATAATATCGATGAAAATACTGATTTTGGTAGTATTCCTGCCATCGAATCTAGTCCAATTCAAACAACTTTGACATTATCGGCCGTTGATAATTGGAGAGGTTATGATTCCACTAAATCGATGGGTAACATCACAATCGATTCGTTGGACGGTGAATTTATTGAATCGATTTCGACAAGAATTGATGATGATACATTGAACGTTATTAAGTTCACAAGTGGTTTAATTAACGAAAATACCGTTTGTGTTATTGAGCATAATAACATTCTTTATTTCTTCCATTATGATGAAAGCTCAAGAAGTTATATTAACACTGAACATGAAGCTAAAGCGTTGTTCGATGATGCGAATTTGACCATCAAGCTGTACACATACAACGTAACCAAATTGGACGGAAGAACAATTCGATTGGTTGACCCGTGTATGAAAGGCGATACCGTTGTTATCGTTTCGTATGTCGATGGAATTGCTTCGTACCGCTCATCATACGAGCGAGCATCGTTGACGATGTATGATTACGACAGTACAGATTCAAACATCACCACCGTGAATGGACAGCGTTGGGTGGGTGAATTAAAAAACAAGTTCACGTTCACACTAAACGATTTTGGATTTCTGGATTCGGTTACATACAATCCTAAATCGTTGGAAGTTCTAATAAACGGGCGTTGCTTAATTCGCGGCGGCGAAGCTGATAATCCAGCGTTTGTGTGCGATGGTGCGGAAGGAAATGACGCTGATACATGCGTTTCTAATGGTGGATTGTGGGTGTTATCTGGTGGCGATTATTCTATTATTCAAAACGAAATGGGAATGTGGCGTGATTTCGTAATCAATGAGCCGCTAGAACATGGTGATATAGTTACCGTTCGTTGGTTTAATAACGACATTGGCACATTGTTGGATTGGGAAGGCGAAGATGGTATTCAGGAACTCGGTGATGGCAGATGGGTGCAATCGGGTGACGAATACGAGAGAAAGAATAATATAGCTTATACGGACCCACAACAGCCGAATAGTAAAACTGCCGTGGTAACTTCAACCGTAGTGAATCAATCAGTTTCGAATGTTCAGGATATATTTGATATGTTATATCCTGTAGGGACTATATACAAAAATGCGCACAACCCAAATAACCCAGCAGATTATATGGGTTTTGGTGTATGGGTTCGATACGCCCAAGGTCGAACTATAGTTTCGTTTAATCAAGATAATCCGAACGATCCAAACTTTGGAATAAATAATCAAGATTTAGACGTAAATGGAAATCCTCGACCTGTAGCAGGTGGTCATGTTGGTGCGGTTAGTCAGACATTGACAGAAAACAATATTCCACAATTATCATCTAACGATTTTAGTTTAATTAAAAATGACAATGGTGATGTGCTAATAGGCGGTTGTCAATATGACCCAGACGAAGAAGGTCCCGGATTTAAAAAGTATTCCGAGAAGAAAATAAATGTTCGTGAAGGTTCGACATCTAATTCGTTTAGTGTAATTCAGCCGTCTGTAACGGCTCATGTATGGTTAAGGGTGCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5c872e5cf9243b79dc7b4da09098321a080c003a20ca4f94e250ea5318bdceed
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5241
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50