Protein

View in Explore
Genbank accession
XCO40829.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MALYREGKAAMAADGTVTGTGTKWQSSLSLIRPGATIMFLSSPIQMAVVNKVVSDTEIKAITTNSAIVASTDYAILLSDSLTVDGLAQDVAETLRYYQSQETVIADAVDFFKDFDFESLQNLASQIKADSEAAESSAAAAAASENAAKTSETNSRASEVAAENARDQVQQIINDAGEQSTLAVLSQPGGASSIGVDDGLTLMDITISSVTAFMAMNISPSKIIVGGFYTRGDGGDGTWVATGNTDASKAGTHVVTEAKIYNASGIEYQLQVGVGMGIISPKANGAKEAANYAETQLDTDNFVCLGQAINGIISALPLWMQPGNNINNQSTYSVINFNISSGLWRIGKEAAKLRSNVIYNLGAATIYVKASASRKFQVTGKYLNGFEHSVEDVEEVYTALGSKLYWESVSLGFTKMTGGKIIGDHVPGTLDSDCTAGVGILALNPWYCSFEDSRVENFRVNLVGMQVRIDEDGVLPSSIVPYKSSLLPEKIGNFYSCVFKNMYVSTARYCCVRLHIDWCQWIGGTISNNGRWASSVSGQQCDYYLIETGHGFHCSGAYLSIPAYNPTERKPNKSVIATAARGSVYSACYMEDTPSYVTILNQWWNDGNEKGFGLNIDCIGSQYRPDRTYKYLTFEEGAFGYYDENEKWVPPAGYGSYPSTNGIDFVRFGSPTHDAGAFPHGGFDFKYGTYGVMYSTNATYPNPPDVDSLRGHKTTKEMFSPYGLMAANGILQLPVLSPALHSNICIWFKDLTGNFDLNNIVLWQGANIDQSTTDVGYNYNLFIAKAEMAIDFGNGYKMAIIQNLKWNNNDGVGTSGSQQSLQFTIPDSTPIVLKSVQAFTGGIPVFPTGINYIPESSDQCIWGNVHPTNGFRYNLFKKVGGGIFAPGDLINPWIAHQRANPDYKFGTTFYEDYGYSNLPRLVKGGNAIGSYFAKDFTVSVVSVDEENGRTTIDVPASYRPYVFMGVPLNIVGGSSTSYTGETRIHKRNINSDGTLSGQYVLDSVVGAAGDTLSISQRELADRTYYQDYKTGNIAVNGEVSLNGTRLRFGYGAATTNTRTLEFFVNGGTTSTATINAYGTSLGYNATSHVFGGNILFDASSTRNIGSSNTLALASYVTKRMYTATVGDFYGSGSPEGVLTASVGSTYRRVDGGAGSSFYVKESGNGNTGWVAK
Physico‐chemical
properties
protein length:1171 AA
molecular weight: 126106,06570 Da
isoelectric point:5,12957
aromaticity:0,11016
hydropathy:-0,17865

Domains

Domains [InterPro]
DC_0313
STR
1–799
DC_0313 DC_2009
XCO40829.1
1 1171
Architecture
STR
RBD
STR 1-799 | RBD 1131-1171
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO40829.1
1 1171
Domain Start End Length (AA) Confidence
N-terminal 1 288 288 0,9917
Central domain 289 773 486 0,9812
C-terminal 774 1171 397 0,4184
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-288
Central
289-773
C-terminal
774-1171

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146046
[NCBI] 		3232225 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO40829.1 [NCBI]
Genbank nucleotide accession
PP889495.1 [NCBI]
CDS location
range 19905 -> 23420
strand -
CDS
ATGGCACTATACAGAGAAGGCAAGGCGGCTATGGCCGCAGACGGAACAGTTACCGGGACTGGCACAAAGTGGCAATCATCGCTTTCGCTGATTCGCCCAGGCGCTACTATTATGTTTTTGTCGTCTCCAATTCAAATGGCCGTCGTAAACAAGGTGGTCAGTGACACGGAAATTAAAGCAATTACCACAAACAGCGCCATCGTAGCGTCTACTGACTACGCGATCCTGTTAAGCGACTCGCTAACCGTTGATGGACTGGCGCAAGATGTTGCGGAAACTTTGCGCTACTATCAGTCGCAAGAAACCGTAATTGCTGATGCGGTAGATTTCTTTAAGGATTTTGATTTCGAATCGCTTCAAAATCTTGCTAGCCAAATTAAGGCTGACTCTGAAGCTGCGGAATCAAGTGCTGCGGCGGCTGCCGCTTCTGAAAATGCGGCAAAAACTTCAGAGACTAACTCCAGGGCTTCAGAAGTGGCTGCGGAGAATGCAAGAGACCAAGTTCAGCAGATCATTAATGACGCTGGCGAACAGTCAACTCTGGCGGTTCTTTCTCAGCCAGGCGGAGCGTCAAGCATTGGTGTTGATGACGGTCTAACACTCATGGATATTACTATATCCTCAGTAACGGCATTTATGGCCATGAATATATCGCCATCAAAGATAATTGTTGGTGGTTTTTATACTCGTGGAGATGGTGGTGATGGTACATGGGTAGCCACCGGAAACACTGACGCATCAAAAGCCGGAACTCACGTCGTCACTGAAGCGAAAATCTATAACGCCAGTGGTATTGAATACCAGCTTCAGGTAGGAGTTGGGATGGGTATTATCAGCCCTAAAGCCAACGGGGCTAAAGAAGCAGCAAACTATGCAGAAACTCAGCTTGATACTGATAATTTCGTATGCCTTGGACAGGCAATTAACGGCATTATCAGCGCTCTTCCATTGTGGATGCAGCCTGGTAACAACATCAATAACCAGAGCACTTACTCGGTAATCAACTTCAATATTTCATCAGGCCTGTGGCGTATCGGGAAAGAGGCTGCGAAGCTGCGTTCCAATGTGATCTACAATCTTGGTGCTGCCACCATTTATGTTAAGGCCAGCGCCTCTCGTAAGTTCCAGGTTACTGGCAAGTACCTTAACGGATTCGAGCATTCTGTAGAAGACGTAGAGGAGGTTTACACGGCACTAGGAAGCAAACTCTATTGGGAGTCAGTAAGCCTTGGGTTTACCAAGATGACCGGAGGGAAAATAATAGGCGATCATGTTCCAGGAACGCTTGATTCTGATTGCACCGCCGGGGTGGGTATTTTGGCTCTAAACCCATGGTATTGTTCGTTCGAAGATAGTCGCGTAGAAAACTTCCGTGTCAACCTGGTCGGTATGCAGGTCAGGATTGACGAAGACGGCGTTCTGCCAAGCAGCATAGTCCCATACAAGTCAAGCCTGCTTCCAGAGAAGATCGGAAACTTCTATAGCTGCGTCTTCAAAAACATGTACGTCAGCACCGCGCGATATTGCTGCGTGCGATTGCATATTGACTGGTGTCAGTGGATTGGTGGGACAATCTCTAACAACGGACGCTGGGCAAGTTCCGTCAGTGGTCAGCAGTGCGATTATTATTTAATAGAAACAGGTCATGGATTCCATTGCTCAGGAGCGTATCTCAGCATTCCGGCGTATAACCCGACCGAGCGCAAACCTAACAAATCCGTTATTGCTACTGCTGCTCGTGGTTCCGTCTATTCTGCTTGCTACATGGAAGACACGCCTTCCTATGTAACTATCCTTAATCAGTGGTGGAACGATGGCAACGAGAAGGGTTTCGGATTAAACATCGATTGCATTGGTTCGCAGTACAGGCCTGACAGGACGTATAAATACTTGACATTCGAGGAAGGTGCGTTCGGATATTACGATGAAAACGAAAAATGGGTTCCTCCAGCAGGATACGGATCATACCCATCAACAAACGGTATTGACTTCGTTCGCTTCGGTAGCCCGACTCACGATGCTGGCGCATTCCCGCATGGCGGATTCGACTTCAAATATGGAACCTATGGTGTGATGTACAGCACAAACGCCACTTACCCAAATCCTCCAGATGTGGACTCACTTCGTGGGCACAAAACCACTAAGGAGATGTTCAGTCCTTACGGATTAATGGCGGCTAATGGAATCCTGCAACTGCCGGTTTTATCGCCTGCGCTGCACAGCAATATATGTATTTGGTTTAAAGACTTGACTGGAAATTTTGACCTAAATAACATCGTGCTGTGGCAGGGAGCTAACATAGATCAATCTACTACGGATGTAGGGTATAACTACAATCTATTTATCGCAAAAGCAGAGATGGCAATAGATTTTGGTAATGGCTACAAAATGGCGATTATTCAAAATCTGAAATGGAATAACAACGATGGTGTAGGCACTTCGGGTAGTCAGCAGTCATTACAGTTCACTATCCCTGACAGTACCCCTATAGTCCTGAAGTCTGTTCAAGCATTCACTGGCGGAATTCCGGTATTCCCGACCGGAATTAACTACATTCCAGAAAGCTCCGATCAGTGTATTTGGGGGAATGTGCATCCGACAAACGGGTTTAGGTACAATTTATTCAAGAAGGTTGGTGGCGGAATTTTTGCACCAGGCGATCTGATTAATCCGTGGATTGCCCATCAGCGAGCCAACCCGGACTACAAGTTCGGTACGACGTTCTACGAAGATTATGGATACAGCAATCTTCCGAGACTAGTAAAAGGCGGTAATGCGATCGGCTCGTACTTTGCGAAGGATTTTACCGTAAGTGTGGTGTCTGTTGACGAAGAAAACGGTCGCACGACTATTGATGTGCCTGCGTCGTATAGGCCCTACGTTTTCATGGGAGTTCCGCTGAATATTGTCGGCGGATCGTCAACAAGCTACACTGGCGAGACGCGAATCCATAAGCGCAACATAAATTCGGATGGCACACTAAGCGGTCAGTATGTTCTTGATTCCGTTGTAGGTGCGGCTGGTGATACCCTCTCCATTAGCCAGAGAGAACTCGCGGATCGCACCTACTATCAAGACTACAAAACGGGAAATATCGCTGTAAATGGAGAGGTATCGCTAAACGGGACGCGACTTCGGTTCGGTTACGGAGCAGCGACTACTAACACCAGAACGCTTGAATTTTTTGTTAACGGTGGAACCACCAGTACCGCCACAATCAATGCTTATGGCACGTCGCTAGGATACAATGCCACAAGTCATGTATTCGGTGGTAACATCTTATTTGATGCTTCGTCAACGAGAAATATTGGTTCTTCCAATACCCTTGCGTTAGCAAGTTATGTTACTAAGCGTATGTATACAGCTACAGTCGGCGATTTTTACGGATCTGGTAGCCCGGAAGGCGTTCTGACTGCTTCAGTAGGATCTACCTACCGAAGAGTTGATGGCGGTGCGGGATCTAGTTTCTATGTAAAAGAGTCTGGTAATGGAAACACGGGATGGGTGGCAAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
0e6023e8bba3585da919e6e5ec4178935670f96fccc8161964aad8e149c3f13f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5254
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank