Protein

View in Explore

Genbank accession

WOZ57167.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence Phold

Probability 1,00

Evidence RBPdetect

Probability 0,90

Evidence RBPdetect2

Probability 0,94

Protein sequence

MQKIGDLTDTADGNGEFTDGNVAGNVQPTELMGGWFTTVQRELIAVLSGAGIEPDPTNDAQVITAIQGLIKKATDDASGVPVGSPIPWPSDTVPDGYALMQGQTFDKAKYPKLAIAYPGGVIPDMRGWTIKGKPASGRVVLSQEQDGIKSHTHSASASNTDLGTKTTSSFDYGTKTTSTFDYGTKTTNTTGEHTHGYTTGAQPSGTRGDWDSDGLRNTVQTSSAGNHAHTVGIGAHNHTVGIGAHSHTIAIGSHGHTITVNASGNAENTVKNIAYNYIVRLA

Physico‐chemical properties

protein length:	282 AA
molecular weight:	29375,87020 Da
isoelectric point:	5,89815
aromaticity:	0,06028
hydropathy:	-0,44681

Domains

Domains [InterPro]

DC_0163
STR
2–282

DC_0163

IPR051934
Unmapped
19–177

IPR051934 SSF88874

SSF88874
STR
77–199

SSF88874 IPR005003 IPR005003

IPR037053
ATT
78–131

IPR037053 IPR005003 IPR005003

IPR011083
ATT
83–130

IPR011083

WOZ57167.1

1 282

Architecture

STR

ATT

STR

STR 2-77 | ATT 78-131 | STR 132-282

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0163	STR	DC_0163	2	282	Novel HMM	DC_0163	Central	Low	Positional only	47 proteins / 47 hits
IPR051934	Unmapped	-	19	177	InterPro	Bacteriophage Tail Fiber Structural Protein	-	-	-	-
SSF88874	STR	SSF88874	77	199	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR037053	ATT	IPR037053	78	131	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
IPR011083	ATT	DC_0235	83	130	InterPro cluster	Phage tail collar domain	C-terminal	Medium	Text match	1051 proteins / 1051 hits
IPR005003	Unmapped	-	146	159	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-
SSF88874	STR	SSF88874	183	281	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR005003	Unmapped	-	188	196	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-
IPR005003	Unmapped	-	222	234	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-
IPR005003	Unmapped	-	241	252	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Citrobacter phage phiNP [NCBI]	3092605	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Citrobacter rodentium [NCBI]	67825	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

WOZ57167.1 [NCBI]

Genbank nucleotide accession

OR565852.1 [NCBI]

CDS location

range 2429 -> 3277
strand -

CDS

ATGCAAAAAATTGGAGATCTCACTGATACCGCAGACGGTAACGGTGAGTTTACTGATGGTAATGTGGCCGGGAATGTCCAGCCCACTGAACTGATGGGTGGGTGGTTTACCACCGTGCAGCGCGAATTAATCGCTGTTCTGTCGGGGGCGGGTATTGAGCCGGATCCGACGAATGATGCACAGGTTATCACTGCCATTCAGGGCCTTATTAAAAAGGCCACAGATGATGCTTCTGGTGTCCCGGTTGGCTCTCCCATTCCCTGGCCGTCGGATACGGTACCGGACGGGTATGCGCTGATGCAGGGCCAGACGTTTGATAAAGCGAAATACCCCAAACTGGCAATTGCGTATCCTGGAGGTGTTATCCCTGATATGCGTGGATGGACAATAAAGGGGAAACCTGCCAGTGGGCGAGTAGTTCTGTCTCAGGAGCAGGATGGCATCAAGTCGCATACCCATAGTGCCAGCGCCTCAAATACGGATTTAGGCACGAAAACAACCAGTTCGTTTGATTATGGGACTAAAACGACCAGTACATTTGATTACGGTACTAAAACTACCAACACAACTGGCGAACATACCCACGGTTATACGACAGGTGCACAGCCATCAGGTACCAGAGGTGATTGGGATTCTGATGGTCTTCGAAATACTGTTCAGACCAGTTCAGCAGGTAACCATGCCCATACCGTAGGCATTGGTGCACACAACCATACTGTCGGTATTGGTGCTCATTCTCATACAATCGCAATCGGTTCGCATGGGCATACCATTACGGTAAATGCTTCTGGTAATGCAGAAAATACTGTAAAAAACATTGCATATAATTACATCGTGAGGCTTGCATAA

Genome Context

Tertiary structure

PDB ID

781322a1b602c0cdbfc5e00890ff8bd289289f76a3491ced843d0d4d1b6ab4c7

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,7999

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence