Protein

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Genbank accession
WKV20433.1 [GenBank]
Protein name
putative GDSL-like lipase/acylhydrolase
RBP type
TSP
Evidence RBPdetect
Probability 0,65
Protein sequence
MSLTPNEMLKALASVGLEGVIASGLISTAGVKPLNRKVAIYGDSRTANCSSGTAPNSFTENYGYASWLGQYSEGRICFDPAYNFGVGGNTTAQWAARVGDVIASDADIVICLISTNDRTADFTLAQTQQNIEATVNKLKAAKKVVVFIAETPRGGSNALSTERQVIHDQVRAWIKSYLPKLGVRVVDVYDRLLDTAANTVDGLHPNPVGARVIAEDVAKGTQDLFDTPALLPRFSSVFDAATNRFGQLNSNSLLTGKSGTLVGSSNTTGVVADGYSVSGSSWAGMSVVASKESGSYGEVQVLSFSGTPTSTGSLYTFEQVVPIASAKLAATIKGVGLVDFEMSGCLGVSLDLRVVDGTTFNVKCCDRYQEGFPMSNVRVSGVQETPVATITATATEVKIRVSVYGSQNVPMKGTVRISQLGAIVS
Physico‐chemical
properties
protein length:425 AA
molecular weight: 44618,87410 Da
isoelectric point:6,20565
aromaticity:0,07059
hydropathy:0,06376

Domains

Domains [InterPro]
IPR051532
Unmapped
22–222
IPR051532 DC_2015
IPR036514
STR
30–220
IPR036514
IPR036514
STR
35–220
IPR036514
SSF52266
STR
36–219
SSF52266
cd00229
ENZ
38–219
cd00229
IPR013830
ENZ
41–211
IPR013830
Coil
Unmapped
124–144
Coil
WKV20433.1
1 425
Architecture
STR
RBD
STR 30-220 | RBD 222-416 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WKV20433.1
1 425
Domain Start End Length (AA) Confidence
N-terminal 1 30 30 0,9437
Central domain 31 230 201 0,4845
C-terminal 231 425 194 0,9950
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-30
Central
31-230
C-terminal
231-425

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage 16Q
[NCBI] 		3053864 No lineage information
Host Pseudomonas syringae pv. syringae
[NCBI] 		321 Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas > Pseudomonas syringae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WKV20433.1 [NCBI]
Genbank nucleotide accession
OR001909 [NCBI]
CDS location
range 23445 -> 24722
strand +
CDS
ATGAGTCTAACACCAAACGAAATGTTGAAAGCTCTGGCGTCTGTCGGTCTTGAGGGCGTCATTGCCAGTGGACTGATCTCTACAGCTGGAGTCAAACCGCTTAACAGAAAAGTTGCCATTTATGGTGATAGCCGAACAGCTAACTGTTCCAGTGGAACAGCTCCAAACAGTTTTACTGAAAACTACGGCTATGCATCATGGCTTGGCCAATATTCAGAGGGTAGAATCTGCTTCGATCCTGCTTATAATTTTGGAGTAGGTGGTAACACCACTGCACAATGGGCAGCTAGGGTTGGTGATGTAATCGCCTCAGACGCTGATATAGTTATTTGTTTGATCTCCACCAACGACCGTACTGCAGATTTTACTTTAGCACAAACCCAACAAAATATTGAAGCAACAGTAAATAAGCTCAAGGCAGCCAAGAAGGTTGTCGTATTTATTGCCGAGACTCCAAGAGGAGGTTCTAACGCCCTCTCTACAGAGAGACAGGTGATACATGATCAAGTGAGAGCTTGGATCAAATCCTACCTGCCTAAGCTGGGTGTCAGAGTTGTTGACGTATATGATCGTCTGCTAGACACAGCAGCGAACACTGTGGATGGTCTCCATCCAAATCCAGTGGGAGCTAGGGTAATTGCTGAGGATGTGGCAAAGGGCACTCAAGACTTGTTCGATACTCCAGCCTTACTGCCTAGATTCTCTAGTGTGTTCGATGCCGCCACAAATAGATTTGGACAGTTAAACTCAAATTCACTGCTAACCGGAAAGTCTGGAACTCTTGTAGGCTCATCAAATACAACTGGCGTTGTCGCAGATGGTTACAGCGTTTCAGGAAGCTCTTGGGCAGGTATGAGTGTTGTAGCTTCTAAAGAATCAGGATCGTATGGAGAGGTTCAAGTTCTTAGCTTCTCTGGAACCCCTACTTCAACAGGCTCACTTTACACCTTTGAGCAGGTTGTACCTATTGCGTCAGCAAAACTAGCTGCAACAATTAAGGGCGTAGGTCTGGTAGACTTTGAGATGTCAGGTTGCCTTGGAGTTAGCCTTGATTTGAGGGTTGTAGATGGTACAACTTTTAATGTGAAGTGCTGTGACAGGTATCAAGAAGGTTTCCCTATGTCGAACGTGAGAGTCTCAGGAGTACAAGAAACTCCAGTGGCCACTATCACTGCGACTGCCACAGAAGTAAAAATTCGTGTGTCAGTGTACGGAAGTCAGAACGTACCAATGAAGGGTACAGTGAGAATAAGCCAGCTTGGGGCAATTGTGTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
993d8ee418c0bd53c1e91964210b3dac20c56cba89bb41f29145756463b935f3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8154
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50