Protein

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Genbank accession
AIK67515.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MARPKAANWVAEATTTSGTGDITLAGPLEGFAQFKVMADGLIYYTLQDGVDKECGVGTLKESGTKISRDQVLASFVGGVYAAPGQKLDLSGYAECYCTVNADLFNSMNDALAKLDGIEDGATADQNANEVPAGQNWLFKSANVQSQLLEAADDIALYSAGATQGTDPDKFVLLQAGKIFSGAVGFVNPADMSVYRTVAPVSGTIVSFTFPTPDSASIVTTSPTATITAARSIMATQDWVNGRESKVQTINAGAAVTIASDQAFTFDITLNQANTSLGLTANGETVNTQREIIVILRQGTGANKVSWPTNIDWSYDSEPVLAFQQGKYDKFQLVKIQGQANWSGSVIGGHYG
Physico‐chemical
properties
protein length:351 AA
molecular weight: 36960,77820 Da
isoelectric point:4,48536
aromaticity:0,08547
hydropathy:-0,06866

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage vB_CsaP_Ss1
[NCBI] 		1498011 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Cronobacter sakazakii ATCC BAA 894
[NCBI] 		290339 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Cronobacter > Cronobacter sakazakii

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIK67515.1 [NCBI]
Genbank nucleotide accession
KM058087.1 [NCBI]
CDS location
range 8881 -> 9936
strand +
CDS
ATGGCAAGACCAAAGGCTGCTAACTGGGTTGCTGAAGCAACCACTACTTCAGGTACGGGTGACATTACCCTCGCAGGGCCACTGGAAGGCTTTGCTCAGTTTAAGGTAATGGCTGATGGCCTTATCTACTACACTCTGCAGGATGGTGTTGACAAAGAGTGTGGCGTCGGCACGCTGAAAGAGAGCGGAACCAAAATCAGCCGTGATCAGGTTCTGGCGTCATTCGTTGGCGGAGTGTATGCAGCGCCTGGGCAGAAGCTTGACCTGTCTGGTTATGCTGAGTGCTACTGTACTGTAAACGCCGACCTGTTCAACTCAATGAATGATGCTCTGGCAAAGCTCGATGGTATTGAAGACGGCGCTACTGCTGATCAGAATGCCAACGAAGTTCCAGCTGGTCAGAACTGGTTGTTCAAATCTGCTAATGTGCAGTCGCAGCTTCTTGAAGCAGCTGATGATATTGCTCTGTACTCAGCAGGCGCTACTCAGGGTACTGACCCTGACAAATTCGTTCTTTTACAAGCTGGTAAAATCTTTAGCGGCGCTGTAGGCTTTGTTAACCCTGCAGACATGTCCGTATATCGTACCGTAGCGCCCGTAAGCGGTACTATAGTTTCCTTTACCTTCCCTACCCCCGATAGCGCCTCAATCGTTACTACAAGCCCTACGGCGACGATTACGGCAGCTCGTAGTATCATGGCTACACAGGACTGGGTAAATGGCAGAGAATCAAAAGTTCAAACTATCAACGCTGGTGCTGCTGTTACTATTGCTTCAGACCAGGCCTTCACCTTTGACATCACTCTCAATCAGGCTAACACCTCGTTGGGTCTTACAGCAAATGGTGAAACAGTTAATACCCAGCGTGAGATTATTGTAATCTTACGTCAAGGCACTGGTGCTAACAAAGTGTCTTGGCCAACCAACATTGACTGGTCTTATGACTCTGAGCCTGTTCTGGCATTCCAGCAGGGCAAGTATGACAAGTTCCAGCTTGTCAAGATTCAGGGTCAGGCAAACTGGTCAGGCTCTGTAATAGGTGGTCATTATGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c7d2fd0439cc5ec16879f427f3a0108130c87e2b80e6c6730caa2407a58ce63f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7357
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of Cronobacter phage vB_CsaP_Ss1 reveals an endolysin with potential for biocontrol of Gram-negative bacterial pathogens Endersen,L., Guinane,C.M., Johnston,C., Neve,H., Coffey,A., Ross,R.P., McAuliffe,O. and O'Mahony,J. 2015 25371517 GenBank