Protein

View in Explore
Genbank accession
UPT53198.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MRVIPPLTITAAMLTSSTAPEPGSGEAEWSSGTTYGLGDTVILAATHRKYESVAVSNLNNPPASDDGTKWIDAGPTNRWACLDLLRDTATVFPASPGTVVITPGQRIDSLALVGLVADSVTVTVTVSAVVKYTHTEDLSTREVLNWYDHFYAPFSSKAAVALFDLPPYTNGVITVTVTRATGSPKLGGIVMGLSAYLGRTLHDAESVALNFSSVDRDFAGNVATMIQRRTVPKTVQKVRCSKSQVNKIIAVRETLNAVPALWSGLDDSDSGYFEALLILGFYRTFTVNMDQPNDALVTLELEEI
Physico‐chemical
properties
protein length:304 AA
molecular weight: 32601,56090 Da
isoelectric point:5,02112
aromaticity:0,07566
hydropathy:0,07697

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage Yong-M4-211
[NCBI] 		2928849 No lineage information
Host Synechococcus sp. PCC 7002
[NCBI] 		32049 Cyanobacteriota > Cyanophyceae > Chroococcales > Geminocystaceae > Picosynechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPT53198.1 [NCBI]
Genbank nucleotide accession
OM868079 [NCBI]
CDS location
range 37206 -> 38120
strand -
CDS
ATGCGCGTCATACCCCCCCTGACGATCACCGCCGCCATGTTGACATCGAGCACGGCGCCAGAGCCGGGCTCGGGCGAGGCCGAGTGGTCGTCCGGCACGACCTACGGCCTGGGCGACACGGTCATCCTGGCCGCGACCCACCGCAAGTACGAGAGCGTGGCCGTCTCGAACCTCAACAACCCTCCGGCATCCGACGACGGCACGAAGTGGATCGACGCCGGCCCGACCAACCGCTGGGCCTGCCTCGACCTCCTGCGGGACACCGCAACGGTGTTTCCGGCGTCCCCAGGAACCGTGGTGATCACGCCGGGCCAGCGGATCGACAGTCTGGCTCTGGTCGGTCTTGTCGCCGACAGCGTCACCGTCACCGTCACCGTCTCCGCGGTCGTGAAGTACACCCACACCGAAGACCTCAGCACGCGCGAGGTGCTCAACTGGTACGACCATTTCTATGCCCCGTTCAGTTCCAAGGCGGCGGTCGCGCTCTTTGATCTGCCGCCGTACACGAACGGTGTCATCACCGTCACGGTAACGCGCGCCACCGGGTCGCCTAAGCTCGGCGGCATCGTCATGGGCCTTTCGGCCTATCTGGGCCGCACCCTGCATGACGCAGAAAGCGTGGCCCTCAACTTCTCGTCCGTCGATCGGGACTTCGCCGGCAACGTCGCGACCATGATCCAGCGCCGGACGGTGCCGAAGACGGTGCAGAAGGTCCGGTGCTCCAAGTCTCAGGTGAACAAGATCATCGCCGTGCGCGAGACCCTGAACGCGGTCCCGGCCCTCTGGTCCGGCCTCGACGACAGCGACAGCGGCTACTTCGAAGCCCTCCTGATCCTGGGCTTCTACCGCACCTTCACCGTCAACATGGATCAGCCGAACGATGCGCTCGTGACGTTGGAACTGGAGGAAATCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
ad5d378eeff86e848ee362b80243b3274770105f828e31703a19172c76311ffd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9459
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic analysis of Synechococcus cyanophage Yong-M4-211 Pan,L., Li,D., Lin,W., Qu,C., Cai,R., Qian,M., Wang,F., Zhou,Q., Liu,W. and Tong,Y. 2024-11 — GenBank