Protein

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Genbank accession
WBF78107.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,82
Protein sequence
MADIVLTGDTSGAITVAAPAVAGTNTLTLPANTGTLMTSTYTSGDVDIDSGTLHVDATNNRVGIGTSSPAHNVEIVATASGSVNDTLQIRNNATATGTGSRIRFINSTDENSDANGASIASIRTGGDNDLAFETENVERMRIKSNGDVLIGTTTDLAAGSEGVEIRGDLGVIYTARNTTANAGHILFYNPNGIVGSIQTTGTTTSYVTSSDYRLKEKVSPMSGSIDRLKQLKPSTWSWKIDGSHGEGFLAHEAQTVVPESATGTKDAMRTEEYEVTPEVLDDDGNVVTEAVMGTREVPDYQGIDQSKLVPLLTAALQEAVTKIEDLETRIQALENA
Physico‐chemical
properties
protein length:336 AA
molecular weight: 35243,33230 Da
isoelectric point:4,46257
aromaticity:0,03869
hydropathy:-0,26905

Domains

Domains [InterPro]
DC_1367
RBD
72–336
DC_1367
IPR030392
CHP
210–330
IPR030392
IPR030392
CHP
210–259
IPR030392 Coil
WBF78107.1
1 336
Architecture
RBD
RBD 72-336
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WBF78107.1
1 336
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0017
Central domain 11 209 200 0,0763
C-terminal 210 336 126 0,9788
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-336

Taxonomy

  Name Taxonomy ID Lineage
Phage Methylophilales phage MEP401
[NCBI] 		3003800 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Methylophilales bacterium
[NCBI] 		2546201 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Nitrosomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBF78107.1 [NCBI]
Genbank nucleotide accession
OP830906.1 [NCBI]
CDS location
range 35978 -> 36988
strand -
CDS
ATGGCTGATATAGTATTAACAGGAGACACCTCTGGAGCTATTACAGTTGCAGCACCAGCAGTTGCAGGAACAAATACACTTACATTACCTGCAAATACAGGGACATTAATGACATCAACATACACTAGTGGAGATGTTGATATAGATTCAGGCACTCTTCATGTAGATGCCACTAATAACAGAGTAGGTATTGGTACAAGTAGTCCAGCACATAATGTTGAGATTGTTGCAACTGCTAGTGGTTCAGTTAATGATACATTACAAATTAGAAACAATGCTACAGCCACTGGTACAGGTTCAAGAATTAGATTTATAAATTCAACTGATGAAAATTCAGATGCAAACGGTGCATCTATTGCATCAATTAGAACTGGGGGTGACAATGATTTAGCGTTTGAGACTGAAAACGTAGAGCGTATGCGTATTAAGTCTAATGGTGATGTGTTGATAGGTACTACAACTGATTTAGCTGCAGGTAGTGAAGGTGTAGAGATTAGAGGAGATTTAGGTGTTATATATACAGCCAGAAATACGACTGCTAATGCTGGTCATATTTTATTTTACAATCCAAACGGGATTGTAGGTAGTATTCAAACAACTGGTACAACAACATCATATGTAACCTCATCAGATTATAGATTAAAAGAAAAGGTATCCCCTATGTCTGGTAGCATAGACAGACTTAAACAACTTAAACCTAGCACATGGTCATGGAAAATAGATGGTTCTCATGGTGAAGGATTCCTTGCACATGAAGCACAAACAGTTGTCCCAGAGTCTGCTACAGGCACTAAAGATGCTATGCGTACAGAGGAGTATGAAGTAACTCCAGAAGTATTAGATGATGATGGTAATGTAGTTACTGAAGCAGTTATGGGAACAAGAGAAGTTCCTGACTATCAAGGCATAGACCAATCTAAACTTGTACCATTATTAACCGCAGCACTACAAGAAGCTGTTACAAAAATAGAAGATTTAGAAACTAGAATACAAGCATTGGAGAACGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f9a102834bbc8621449e666ff198e710b100a2ee3efe32ac71e93b66eb7db576
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7985
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50