Protein

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Genbank accession
XCP73853.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MRQISISLADNPLGANPLVGLYKAINARYASLGLTQSNSRVLRVQPAATQERPNQSVVFIQKGTSYDTIYDFYYDRFNINDYIKNPYWTAEEVTKVQGMKTSVAVLNEVAKKSKLNLTKTDAWTAEASIDYTGGKVGPNWLLKSVYNSIYFTGELVLWLHSGGNTPGPDPEPGDKFYEHIFEGNISNYIPGQFGNPGSYVSFTVQQNGNRVYVLEPIPEGQKIPSLNWPAYHENDSEVLVPGHEWIIVNNSGHDLPFDPEALSRNTYYLPDWSVIAIKQGGTVRGTAIRWDTATSKWEWAISGDLIQGKTIGSEIKDNLISWYAMEGIAIDSHGGMNFGLNSDNTIDGKVGKALNIIKASGAEGSFGSYNSGISMFGWFKVNAPSVAQEYVLTLGKFGQYYGCKFGLSYQAANGWRGFTRNANDAETTVSTGGQGMGNGQWQFLVLQVKDRYLEISLNGGPMIRREITTPSSASYNGLQFGEIFSNTSYNGAADEVGLCWRALEPEEIAWLYNGGQGRTYETLV
Physico‐chemical
properties
protein length:524 AA
molecular weight: 57801,82210 Da
isoelectric point:5,27673
aromaticity:0,12214
hydropathy:-0,35630

Domains

Domains [InterPro]
G3DSA:2.60.120.200
STR
270–513
G3DSA:2.60.120.200
G3DSA:2.60.120.200
STR
285–513
G3DSA:2.60.120.200
IPR013320
STR
366–516
IPR013320
PF13385
LEC
370–509
PF13385
XCP73853.1
1 524
Architecture
STR
STR 270-516 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCP73853.1
1 524
Domain Start End Length (AA) Confidence
N-terminal 1 46 46 0,7407
Central domain 47 250 205 0,6480
C-terminal 251 524 273 0,3857
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-46
Central
47-250
C-terminal
251-524

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage HPP-Temi
[NCBI] 		3234043 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCP73853.1 [NCBI]
Genbank nucleotide accession
PP968062 [NCBI]
CDS location
range 141170 -> 142744
strand -
CDS
ATGCGTCAAATTTCTATTTCTCTGGCGGACAACCCGTTAGGGGCTAACCCCCTTGTTGGGCTTTATAAAGCGATTAACGCTCGATACGCTAGTCTGGGTCTAACTCAGAGTAACTCACGTGTGTTGCGCGTACAACCGGCCGCTACGCAAGAACGTCCCAACCAGTCTGTGGTCTTCATTCAGAAAGGTACGTCGTACGATACGATCTATGATTTCTATTATGATCGGTTCAATATCAACGATTACATTAAAAATCCTTACTGGACTGCTGAAGAAGTAACGAAAGTTCAAGGGATGAAAACCTCCGTAGCTGTACTGAATGAAGTAGCCAAGAAGTCTAAGTTGAACTTGACTAAGACCGATGCTTGGACTGCCGAAGCCTCTATCGATTATACCGGTGGTAAGGTCGGACCTAACTGGCTATTGAAGTCTGTCTACAACTCCATCTATTTCACGGGTGAATTGGTACTATGGCTTCACTCTGGCGGTAATACCCCTGGACCAGATCCAGAACCCGGTGATAAGTTCTATGAACATATCTTCGAAGGTAACATCTCCAACTATATTCCCGGTCAGTTTGGTAACCCAGGTTCGTATGTTTCTTTCACGGTGCAACAGAACGGTAATCGAGTCTATGTACTAGAGCCTATCCCTGAAGGTCAAAAGATTCCTTCTTTGAACTGGCCAGCATATCACGAGAATGATTCTGAAGTATTAGTACCGGGACATGAATGGATTATTGTGAATAACTCTGGTCATGACCTACCGTTCGATCCTGAAGCTTTATCTCGTAATACATACTACCTCCCCGATTGGAGCGTTATCGCCATTAAACAAGGTGGTACAGTTCGTGGTACTGCAATCCGTTGGGATACCGCAACCAGTAAGTGGGAATGGGCTATCTCTGGTGATTTGATACAGGGTAAGACCATTGGTAGTGAGATCAAGGATAACCTGATTAGTTGGTACGCTATGGAAGGTATCGCTATCGACTCTCACGGTGGTATGAACTTTGGCTTGAACTCCGATAACACCATTGACGGTAAAGTCGGTAAAGCTCTGAACATTATTAAAGCTTCTGGCGCCGAAGGTAGCTTCGGTAGTTATAATAGTGGTATCTCTATGTTCGGCTGGTTCAAAGTCAACGCTCCTTCTGTTGCACAAGAATACGTTCTTACTCTCGGTAAGTTCGGCCAGTACTACGGTTGTAAGTTTGGACTGTCGTATCAAGCAGCGAATGGATGGCGCGGCTTTACCCGAAATGCTAACGACGCTGAGACAACTGTGTCTACTGGTGGTCAAGGTATGGGTAATGGGCAATGGCAGTTCCTGGTACTCCAAGTTAAAGATCGTTACCTTGAGATCTCTCTCAATGGCGGCCCTATGATCCGTCGTGAGATTACTACTCCAAGTAGTGCTTCTTATAACGGACTGCAATTCGGTGAGATCTTCAGTAACACTTCCTATAATGGAGCAGCGGATGAAGTTGGTCTTTGCTGGCGCGCATTGGAACCTGAAGAGATTGCTTGGCTGTACAACGGCGGGCAGGGTCGTACATACGAGACTCTAGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
932944a4eaf15616e03b59c6409c212eea73be041e621ae10297add8f256cfd0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6617
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of Pseudomonas phage HPP-Temi Olorundare,O.O., Agu,C.G., Kabantiyok,D., Ogundeji,A., Dung,T., Zrelovs,N., Svanberga,K., Jansons,J., Kazaks,A., Morenikeji,R.O. and Pewan,B.S. 2024-10-25 — GenBank