Protein

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Genbank accession
AZS06262.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MADYYGARITPDDGGKPLILDAYTRFMSNLANGVSLKGNVTTNQIKAPTVGAMPLIVPRKLVTIYPGESTPNMYWIESISLDAGGLLTHVPKGGSNLPVDRQPAEVGNVDVFSVDGGASPKGSYGVRITNGSNFMEINDTTYLGFVTYRAVVNINNTWDIPPAIVARGPYVVYARWDNTSTPLFLNRDNNRIECFTAFSNTEGSSIGGTVNNVMIVIISCAFVPDLPASGWGMVIRNAQGVVTFSSKYPPVIWRGGRYDFQFYRNFDTSSGEVLQWTDVSAPAGVSVAAPMIPLCSIGVQRGDYSRSGGTWTYRPVLYSGFKMSGNRVSSARAKSAGTDAPVTLNVKAMQVGCSIPCIDAADYF
Physico‐chemical
properties
protein length:364 AA
molecular weight: 39174,97080 Da
isoelectric point:8,18344
aromaticity:0,10440
hydropathy:-0,03297

Domains

Domains [InterPro]
IPR045604
STR
10–253
IPR045604
AZS06262.1
1 364
Architecture
STR
STR 10-253 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AZS06262.1
1 364
Domain Start End Length (AA) Confidence
N-terminal 1 226 226 0,0885
Central domain 227 353 128 0,0014
C-terminal 354 364 10 0,9968
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-226
Central
227-353
C-terminal
354-364

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage vB_PagS_MED16
[NCBI] 		2499074 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pantoea agglomerans
[NCBI] 		549 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZS06262.1 [NCBI]
Genbank nucleotide accession
MK095605 [NCBI]
CDS location
range 19001 -> 20095
strand +
CDS
TTGGCTGATTACTATGGCGCACGCATTACCCCCGATGACGGGGGTAAGCCGCTTATTCTGGATGCCTACACCAGGTTTATGTCAAACCTGGCGAATGGGGTGTCGCTTAAGGGCAACGTCACGACCAACCAGATAAAAGCGCCAACTGTTGGCGCTATGCCGCTCATCGTTCCGAGAAAGCTGGTTACTATCTATCCGGGTGAGTCAACGCCCAACATGTATTGGATCGAGTCAATCAGCCTGGATGCTGGAGGGCTGCTCACCCACGTCCCAAAAGGCGGGAGTAACCTTCCGGTTGATCGCCAGCCCGCTGAGGTTGGCAACGTAGACGTTTTTTCAGTGGACGGCGGCGCATCTCCTAAAGGCTCCTATGGCGTCAGGATTACGAATGGCTCCAACTTCATGGAGATCAACGACACGACATATCTTGGGTTCGTCACCTACCGCGCCGTAGTCAACATCAATAACACGTGGGACATTCCTCCGGCCATCGTGGCGCGCGGTCCGTATGTCGTTTATGCCCGCTGGGATAACACATCGACGCCGCTATTCCTGAACCGTGACAACAATCGGATCGAGTGCTTCACGGCATTCAGCAACACCGAAGGATCGTCTATCGGCGGGACGGTTAACAATGTGATGATTGTCATTATCTCCTGCGCTTTCGTCCCTGACCTGCCAGCATCCGGCTGGGGTATGGTCATCAGGAATGCTCAGGGAGTGGTGACTTTCTCCAGCAAGTACCCGCCAGTTATCTGGCGCGGTGGTCGGTATGACTTCCAGTTTTATCGCAACTTCGATACCAGCAGTGGTGAGGTTCTACAGTGGACAGATGTTAGCGCACCTGCAGGGGTTTCGGTGGCAGCGCCGATGATCCCGCTGTGTAGTATCGGCGTGCAGCGTGGAGACTATAGCCGATCCGGTGGGACGTGGACCTATCGTCCGGTACTGTACTCAGGTTTCAAGATGTCAGGCAATCGCGTATCATCAGCCAGGGCTAAATCAGCCGGGACTGACGCACCAGTCACCCTAAACGTCAAAGCGATGCAGGTAGGATGTTCTATCCCCTGTATCGACGCGGCAGACTACTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d556d714f9b05914a56f650d0cf29987bc3d60bdec986283d84a521b24191c07
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7516
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Pantoea phage vB_PagS_MED16 Truncaite,L., Simoliuniene,M., Kazlauskas,D., Meskys,R. and Simoliunas,E. 2011-08-10 — GenBank